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Dear Team,
I'm new to Prodigal. I have generated the gene coordinates (gbk) and protein (.faa) files using prodigal/2.6.3. what is the best way to visualize the predicated protein?
Thank you
Samik
dhyatt1
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Apr 15, 2016, 7:53:46 PM4/15/16
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This is more a question for Google (i.e. googling "visualize gff files" gives good results).
It is likely easier to visualize GFF than the default pseudo-gbk format (i.e. use the '-f gff' option).