As of PreTeXt CLI release 2.27 (PreTeXt core commit 132ca234495d16ffbb8ad75fc06375f991000db4), PreTeXt will ignore publication settings specifying the "old" HTML themes and instead use a best guess "new" replacement theme.
Why:
The new themes for web builds have been in place for ~9 months and are in use by many major projects. All new styling and development is focused on these themes. The older themes are not being updated with new features or to accommodate changes to existing features. Thus, the quality of visual output they provide has decreased over recent months and will only continue to do so.
So PreTeXt is moving from just warning about use of the old themes to actively deprecating them. In addition to the deprecation warning that has been in place for 9 months, a warning will be emitted to let you know what theme is being used. A future release will remove the code related to producing the old themes.
How can I specify a particular theme?
If you do not have one, or if you have one with an attribute theme="X", you are using the new themes already.
If you have one and it has an attribute style="X", you are using one of the old themes.