Dear colleagues:
I ran into a problem during I using PPLACER
I typed "pplacer -t ../test_ref.nwk -r ../test_ref.fasta aln.fasta",
However, a Uncaught exception occurred:
Uncaught exception: syntax error parsing between line 1 character 21593 and line 1 character 21594 of ../test_ref.nwk
Running pplacer v1.1.alpha19-0-g807f6f3 analysis on aln.fasta...
Fatal error: exception Ppatteries.Sparse.Parse_error("syntax error parsing", _, _, _).
I have trouble to find what's wrong in the "nwk" file, and the file can be found in appendix.
sincerely