Hi all!

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Tatiana

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Dec 17, 2009, 8:07:37 PM12/17/09
to poy4
I am new in systematicsI don't know much !!!!!
I'm running a sensitivity analysis of total evidence and not whether
the weighing of the morphology is the same way that the molecular data

This is my script

read("18s.fas", "rbcl.fas", "rps.fas", "morfo.ss")
set(root:"t1")
transform((names:("18s.fas"), tcm:"111.txt"),(names:("rbcl.fas"),
tcm:"111.txt"),(names:("rps.fas"), tcm:"111.txt"))
store("misdatos")
build(70)
select()
swap()
select()
transform((all, static_approx))
report("test1.mtr", phastwinclad)
echo ("tot Results", output:"Sensitivity_results.txt")
report ("Sensitivity_results.txt", treestats)
select(best:0)
use("misdatos")
select(characters,names:("18s.fas"))
build(70)
select()
swap()
select()
echo("18s.fas Results", output:"Sensitivity_results.txt")
report("Sensitivity_results.txt", treestats)
transform((all, static_approx))
report("test2.mtr", phastwinclad)
use("misdatos")
select(best:0)
select(characters,names:("rbcl.fas"))
build(70)
select()
swap()
select()
echo ("rbcl.fas Results", output:"Sensitivity_results.txt")
report ("Sensitivity_results.txt", treestats)
transform((all, static_approx))
report ("test3.mtr", phastwinclad)
use("misdatos")
select(best:0)
select(characters,names:("rps.fas"))
build(70)
select()
swap()
select()
echo ("rps.fas Results", output:"Sensitivity_results.txt")
report ("Sensitivity_results.txt", treestats)
transform((all, static_approx))
report ("test4.mtr", phastwinclad)
quit()

thanks

Tatiana

ward wheeler

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Dec 21, 2009, 11:26:10 AM12/21/09
to po...@googlegroups.com
Tatiana,
Sorry so long to reply.
As you have it here, all transformations are weighted '1' so all the same.
W
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Ward Wheeler
Division of Invertebrate Zoology
American Museum of Natural History
Central Park West at 79th Street
New York, NY 10024-5192
USA

http://research.amnh.org/scicomp/projects/poy.php

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