Topologies
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Apr 2, 2017, 5:10:14 PM4/2/17
to popABC
Hi there!
I'm using PopABC to infer demographic history of 8 natural populations. I have difficulties on write the next topology:
Neanc
|
t5|| -----------------
|| | |
|| Neanc Neanc
|| | |
t4|| -------- --------
|| | | | |
|| Neanc | | |
|| | | | |
t3|| -------- | | |
|| | | | | |
|| Neanc | | | |
|| | | | | |
t2|| ------- | | | |
|| | | | | | |
|| Neanc | | | Neanc |
|| | | | | | |
t1|| ----- | | | ----- |
|| | | | | | | | |
\/ 0 1 2 3 4 5 6 7
How can I specify that populations 0,1 and 5,6 joint together at the same time?
I supposed that the topology scheme was like this: 1 ->-0, 2->0, 3->0, 4->0, 6->5, 7->5, 5->0, but this results in seven divergence time.
And finally, is it possible to model de following topology??
Neanc
|
t5|| -----------------
|| | |
|| Neanc Neanc
|| | |
t4|| -------- --------
|| | | | |
|| Neanc | Neanc |
|| | | | |
t3|| -------- | ------- |
|| | | | | | |
|| Neanc | | | | |
|| | | | | | |
t2|| ------- | | | | |
|| | | | | | | |
|| Neanc | | | Neanc | |
|| | | | | | | |
t1|| ----- | | | ----- | |
|| | | | | | | | |
\/ Ne Ne Ne Ne Ne Ne Ne Ne
I appreciate your help!
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