Error: Failed to open A1.bed.

[Xin Wang]

I was trying to recode bed file to 012 in linux.I entered code below：

zhangyao@stat-calc:~$plink --bfile A1 --recodeA --out mysnp.bed (A1 is my bed filename)

PLINK v1.90p 64-bit (26 Feb 2022)              www.cog-genomics.org/plink/1.9/
(C) 2005-2022 Shaun Purcell, Christopher Chang   GNU General Public License v3
Note: --recodeA flag deprecated.  Use "--recode A ...".
Logging to mysnp.bed.log.
Options in effect:
  --bfile A1
  --out mysnp.bed
  --recode A

128618 MB RAM detected; reserving 64309 MB for main workspace.
Error: Failed to open A1.bed.

Maybe someone know how to solve this problem.

[Christopher Chang]

1. You probably did not specify the correct directory for your input file.
2. You probably want to replace "--out mysnp.bed" with "--out mysnp", unless you want a file named "mysnp.bed.bed".

[xin. wang]

Thank you. It works.

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