converting binary file to ped/map file

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Jungmin Pyun

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Mar 2, 2023, 3:17:59 AM3/2/23
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Dear all, 

I try to convert binary file to ped/map file for use in liftOverPlink.py.

./plink2 --bfile base --export ped --out out 

I got 
Error: Only VCF, BCF, oxford, bgen-1.x, haps, hapslegend, A, AD, A-transpose,
and ind-major-bed output have been implemented so far.

Is there any way to get ped/map file? 

Thanks in advance.

Jung-Min

Christopher Chang

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Mar 2, 2023, 11:23:54 AM3/2/23
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Update your plink2 build.
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