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Seohan
Sep 5
unhandled image image type
Hi Plastimatch users, while I was trying to change the data type of mask, I faced an error i could
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unhandled image image type
Hi Plastimatch users, while I was trying to change the data type of mask, I faced an error i could
Sep 5
Lena Nenoff
,
Franciska Lebbink
2
Sep 4
2D to 2D DIR for cine MRI
Dear plastimatch community, dear Greg, We got a bit further with the registration by applying a mask
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2D to 2D DIR for cine MRI
Dear plastimatch community, dear Greg, We got a bit further with the registration by applying a mask
Sep 4
Antonio Ulloa
,
Sharp, Gregory C.
4
Aug 30
Container?
Thanks for the quick response; I managed to build a container using a recent version of Debian and
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Container?
Thanks for the quick response; I managed to build a container using a recent version of Debian and
Aug 30
Michele Avanzo
,
Sharp, Gregory C.
4
Aug 17
Cannot install plastimatch on Google Colab anymore
thanks for info, Gregory! best Il giorno mer 16 ago 2023 alle ore 16:56 Sharp, Gregory C. <gcsharp
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Cannot install plastimatch on Google Colab anymore
thanks for info, Gregory! best Il giorno mer 16 ago 2023 alle ore 16:56 Sharp, Gregory C. <gcsharp
Aug 17
kiyoshi yoda
,
Sharp, Gregory C.
4
Aug 9
The default algorithm of Plastimatch DRR
Dear Greg, I have tried the drr with no -i option, -i exact and -i uniform. Major differences were
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The default algorithm of Plastimatch DRR
Dear Greg, I have tried the drr with no -i option, -i exact and -i uniform. Major differences were
Aug 9
Seohan
,
Sharp, Gregory C.
3
Jun 15
registration between masks
Hi Greg! Thank you for your prompt reply. Now it works!! Seohan FYI: I leave a solution code for
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registration between masks
Hi Greg! Thank you for your prompt reply. Now it works!! Seohan FYI: I leave a solution code for
Jun 15
Rok3y
Jun 6
Convert RTSTRUCT issue
Hello, I am trying to apply vector field to RTSTRUCT to contours.dcm file (note: file in dicom format
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Convert RTSTRUCT issue
Hello, I am trying to apply vector field to RTSTRUCT to contours.dcm file (note: file in dicom format
Jun 6
Michael Colonel
Apr 24
Initial volume orientation in DRR computation.
Greetings, I'm trying to add support for volume which orientation is different from LPS (DICOM
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Initial volume orientation in DRR computation.
Greetings, I'm trying to add support for volume which orientation is different from LPS (DICOM
Apr 24
Daisy S
, …
Paolo Zaffino
3
Apr 21
LINUX version update
Hi, if you install plastimatch from distro repository, you are forced to use the binary version
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LINUX version update
Hi, if you install plastimatch from distro repository, you are forced to use the binary version
Apr 21
Jeremy Lim
, …
Sharp, Gregory C.
6
Apr 21
Registration failures and crashes
I have also shared the images that only failed to register at λ = 0.1 but was successful at other
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Registration failures and crashes
I have also shared the images that only failed to register at λ = 0.1 but was successful at other
Apr 21
Daisy S
,
Sharp, Gregory C.
2
Feb 27
Plastimatch DRR energy level
Hi Daisy, The default is 50 keV mono-energetic (from NIST). I'm afraid it is not easily
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Plastimatch DRR energy level
Hi Daisy, The default is 50 keV mono-energetic (from NIST). I'm afraid it is not easily
Feb 27
Nico
,
Sharp, Gregory C.
4
Feb 22
macOS installation error
Wow, great! Thank you for this. It's hard for me to test since I don't have a mac. -Greg From
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macOS installation error
Wow, great! Thank you for this. It's hard for me to test since I don't have a mac. -Greg From
Feb 22
G Tom
,
Sharp, Gregory C.
22
Feb 13
Using plastimatch in c# application
Hi Greg, thanks for your reply. Option 1 looks hardest. Option 3 might be the easiest but needs an
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Using plastimatch in c# application
Hi Greg, thanks for your reply. Option 1 looks hardest. Option 3 might be the easiest but needs an
Feb 13
Seohan
,
Sharp, Gregory C.
4
Feb 12
output with hole-like structure
Hi Greg. I found the command for what I wanted to do. Sorry to confuse you. Also, could you give me
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output with hole-like structure
Hi Greg. I found the command for what I wanted to do. Sorry to confuse you. Also, could you give me
Feb 12
MatGoDro
,
Sharp, Gregory C.
2
Feb 2
Custom rasterization in RTStruct from coronal MR images
Hi Mathieu, Sorry for the delay in response. Regrettably, this is a known limitation. The first
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Custom rasterization in RTStruct from coronal MR images
Hi Mathieu, Sorry for the delay in response. Regrettably, this is a known limitation. The first
Feb 2
G Tom
,
Sharp, Gregory C.
6
Feb 2
2D RTDose support
Hi GT, Thank you for reporting and also for testing. Plastimatch internals are almost entirely 3D, so
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2D RTDose support
Hi GT, Thank you for reporting and also for testing. Plastimatch internals are almost entirely 3D, so
Feb 2
Daisy S
,
Sharp, Gregory C.
2
Feb 1
Ray type of DRR
Hi Daisy, Point source only. Parallel is not supported, but you can approximate by making SAD very
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Ray type of DRR
Hi Daisy, Point source only. Parallel is not supported, but you can approximate by making SAD very
Feb 1
Aryan Raj Tiwary
,
Sharp, Gregory C.
8
12/13/22
Data loss using plastimatch convert(nifti to dicom)
The images have continuous distribution. I can change intensity range visible but I can't include
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Data loss using plastimatch convert(nifti to dicom)
The images have continuous distribution. I can change intensity range visible but I can't include
12/13/22
Andrew Fields
,
Sharp, Gregory C.
2
12/2/22
"Finding" Anatomy in DRR
Hi Andrew, For isocentric imaging, the default nrm is pointing toward the source, and the default vup
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"Finding" Anatomy in DRR
Hi Andrew, For isocentric imaging, the default nrm is pointing toward the source, and the default vup
12/2/22
Seohan
,
Sharp, Gregory C.
2
12/2/22
install error on centos 8
Hi Seohan, Are you building from git or tarball? If git, I think this has been fixed. Update your
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install error on centos 8
Hi Seohan, Are you building from git or tarball? If git, I think this has been fixed. Update your
12/2/22
Alexandra B
,
Sharp, Gregory C.
6
11/23/22
Applying rigid registration of two MR images using plastimatch warp
Hi Greg, Thank you so much, this helps a lot. I will try and retrace your steps to see if I get the
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Applying rigid registration of two MR images using plastimatch warp
Hi Greg, Thank you so much, this helps a lot. I will try and retrace your steps to see if I get the
11/23/22
Yalçın Kuzay
,
Sharp, Gregory C.
8
11/14/22
Plastimatch threshold-based segmentation
Hi Yalcin, Sounds good. As long as you are getting good segmentations, all is well. Greg
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Plastimatch threshold-based segmentation
Hi Yalcin, Sounds good. As long as you are getting good segmentations, all is well. Greg
11/14/22
Andrew Fields
, …
Paolo Zaffino
4
11/10/22
PFM Conversion
Thank you for the recommendations, George and Paolo! Andrew On Thu, Nov 10, 2022 at 7:31 AM '
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PFM Conversion
Thank you for the recommendations, George and Paolo! Andrew On Thu, Nov 10, 2022 at 7:31 AM '
11/10/22
Andrew Fields
,
Sharp, Gregory C.
5
11/9/22
Thresholding .mha Before DRR Generation
Hi Andrew, I expect no difference in resolution. The adjust command creates an output image with the
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Thresholding .mha Before DRR Generation
Hi Andrew, I expect no difference in resolution. The adjust command creates an output image with the
11/9/22
Sharp, Gregory C.
11/4/22
Plastimatch 1..9.4 has been released
Hi all, It's been a long time. Thank you everyone for reporting bugs and submitting patches.
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Plastimatch 1..9.4 has been released
Hi all, It's been a long time. Thank you everyone for reporting bugs and submitting patches.
11/4/22
Daisy S
,
Sharp, Gregory C.
7
10/26/22
DRR generator angle question
Hi Daisy, The drr options are terrible, by the way. I should make them easier to use. The -r option
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DRR generator angle question
Hi Daisy, The drr options are terrible, by the way. I should make them easier to use. The -r option
10/26/22
Jeremy Lim
,
Sharp, Gregory C.,PHD
4
10/12/22
Effect of image offset on DIR
Hi Jeremy, Very interesting data. Thanks! Qualitatively, the data are consistent with numeric
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Effect of image offset on DIR
Hi Jeremy, Very interesting data. Thanks! Qualitatively, the data are consistent with numeric
10/12/22
Sheng Joey
,
Sharp, Gregory C.,PHD
3
10/6/22
change of default filled HU value of the img_out in rigid registration
Dear Greg, Thank you for your quick reply. The following command worked just as expected. >
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change of default filled HU value of the img_out in rigid registration
Dear Greg, Thank you for your quick reply. The following command worked just as expected. >
10/6/22
Paul Ehrlich
,
Sharp, Gregory C.
5
7/7/22
Dockerized plastimatch container
Hi Greg, I think I found the issue. As mentioned, I found it odd that the exact Dockerfile would
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Dockerized plastimatch container
Hi Greg, I think I found the issue. As mentioned, I found it odd that the exact Dockerfile would
7/7/22
ian postuma
,
Sharp, Gregory C.
2
7/5/22
Install on Ubuntu 22.05
Hi Ian, I just tried it, and it built and ran flawlessly. There are two things that stick out to me.
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Install on Ubuntu 22.05
Hi Ian, I just tried it, and it built and ran flawlessly. There are two things that stick out to me.
7/5/22