Fwd:

[HongKee Moon]

Begin forwarded message:

From: Andrei Rozanski <roza...@mpi-cbg.de>

Subject: Fwd:

Date: 1 August 2019 at 16:17:42 GMT+2

To: HongKee Moon <mo...@mpi-cbg.de>

Hi HongKee,

I have answered but forgot to cc planmine mail.

Thanks!

Best,

AndreiR

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From: "Andrei Rozanski" <roza...@mpi-cbg.de>
To: "maxnest research" <maxnest....@gmail.com>
Sent: Thursday, August 1, 2019 4:15:11 PM
Subject: Re:

Dear Maksim,

Thanks for using Planmine!

One easy way to get aminoacid sequences is to download a S mediterranea transcriptome assembly (i.e. dd_Smed_v6) from planmine (Data sources - http://planmine.mpi-cbg.de/planmine/aspect.do?name=Transcriptomes) and run transdecoder (https://github.com/TransDecoder/TransDecoder/wiki) on it.

Please do not hesitate to contact me if you have further questions.

Best,

AndreiR

Bioinformatics,

Rink Lab

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From: "maxnest research" <maxnest....@gmail.com>
To: "planmine" <plan...@mpi-cbg.de>
Sent: Wednesday, July 31, 2019 9:57:52 AM

Name: Maksim Nesterenko
Email: maxnest....@gmail.com


Dear colleagues,
Thank you for extremely important and useful resource. I am writing to you asking for access to the all predicted aminoacid sequences for Schmidtea mediterranea S2FS genome or any instruction how I can get all proteins from this genome for further research. I would be very grateful for your help.

Yours sincerely,
Maksim Nesterenko
Department of Invertebrate Zoology,
Saint-Petersburg State University, Russia

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HongKee Moon
Scientific Software Engineer, Scientific Computing Facility

Max Planck Institute of Molecular Cell Biology and Genetics
Pfotenhauerstr. 108, 01307 Dresden, Germany

Office: 008@CSBD
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