Pre-assignment File Error

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Christopher Williams

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Aug 16, 2021, 4:00:48 PM8/16/21
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Hi,

I am currently trying to use I-PINE Web Server to get the side chain assignments. I already have a Pre-Assignment file prepared with all of the H, N, C, CA, CB shifts to make this easier, but I am getting an error with the submission regarding the file " % Error: Pre-assignment file is not in the correct format. "

I have attached a screenshot of the first bit of the file, but can offer more information if needed. Any clue as to whats wrong with my format? The file DOES end with the stop_ save_ lines.

-Chris
preassignment file.PNG

Lee, Woonghee

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Aug 16, 2021, 4:06:20 PM8/16/21
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Dear Chris,

 

Does you sequence start with residue number 27? If your numbers in the pre-assignment do not agree with your sequence which is considered to start with 1, it will fail.

 

Best,

Woonghee

 

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Woonghee Lee, I.E.I.P., M.S., Ph.D.

 

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From: <pinenmr-u...@googlegroups.com> on behalf of Christopher Williams <cwil...@ucr.edu>
Date: Monday, August 16, 2021 at 2:00 PM
To: I-PINE/PINE and ssPINE user group <pinenmr-u...@googlegroups.com>
Subject: Pre-assignment File Error

 

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Christopher Williams

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Aug 16, 2021, 4:50:06 PM8/16/21
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Thank you very much, that seemed to be the issue. Just needed to make my pre-assignment appear to start at 1 instead of the 27. Thank you.

-Chris
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