C-sibelia - 3.0.7

[Sanya Puri]

Finding synteny blocks and generating the output...
Calling variants...
An error occured: Using 269159_0block.fasta 269159_1block.fasta (12, 0, 25, 0) x
Using 269159_0block.fasta 269159_1block.fasta (13, 1, 30, 0) x
Using 269159_0block.fasta 269159_1block.fasta (8, 1, 30, 0) x
Using 269159_0block.fasta 269159_1block.fasta (7, 1, 30, 0) x
0 cumulative anchors

command i used :

for file in *.fa

do
   C-Sibelia.py deng_r1.fasta "$file" -v "${file%_clean.fa}_out.vcf"
done