Hello everyone
I installed PICRUST2 from bioconda, via the following two commands.
conda create -n picrust2 -c bioconda -c conda-forge picrust2=2.4.1 -y
conda activate picrust2
and then the environment was successfully activated.
However, when I tried to run {picrust2_pipeline.py -s dna-sequences.fasta -i feature-table.biom -o picrust2_out_pipeline -p 12 -r /mnt/c/BIO1/miniconda3-1/envs/picrust2/lib/python3.9/site-packages/picrust2/default_files/prokaryotic/pro_ref --in_traits COG,EC,KO,PFAM,TIGRFAM} command, I got an error {picrust2_pipeline.py: command not found}.
I wish you help me in this
Thanks in advance
BR