Picrust2 and metatranscriptome comparisions

28 views
Skip to first unread message

KB

unread,
Sep 2, 2021, 8:41:37 PM9/2/21
to picrus...@googlegroups.com
Hi there,

I am preparing to get 16S sampling and metatranscriptomic analysis done on a humanized microbiota. Cost barriers prevent me from doing both metagonimc sequencing and metranscriptomics. I am wondering if picrust 2 outputs can be used in Humann2 for parallel metagenomic and metatranscriptomic analyses as is done routinely with shotgun metagenomic data. I imagine this can be done with reasonable accuracy at the gene family level?


Thank you!
KB
Reply all
Reply to author
Forward
0 new messages