problem phy2 and 'utf-8' after update

[Mattia D'Andola]

Hi,

in the attempt of solving a reclustering problem, I updated my phy2 environment, and since then I get a codec error. For every .kwik file I try to open, I get the error reported below.
A note: All the file where already successfully opened at least once with the previous version.
Any idea on how to solve this?

thank you,
Mattia

13:59:06.411 [E] __init__:62          An error has occurred (UnicodeDecodeError): 'utf-8' codec can't decode byte 0x89 in position 0: invalid start byte
Traceback (most recent call last):
  File "/home/takeokalab/anaconda3/envs/phy2/bin/phy", line 8, in <module>
    sys.exit(phycli())
  File "/home/takeokalab/anaconda3/envs/phy2/lib/python3.7/site-packages/click/core.py", line 764, in __call__
    return self.main(*args, **kwargs)
  File "/home/takeokalab/anaconda3/envs/phy2/lib/python3.7/site-packages/click/core.py", line 717, in main
    rv = self.invoke(ctx)
  File "/home/takeokalab/anaconda3/envs/phy2/lib/python3.7/site-packages/click/core.py", line 1137, in invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
  File "/home/takeokalab/anaconda3/envs/phy2/lib/python3.7/site-packages/click/core.py", line 956, in invoke
    return ctx.invoke(self.callback, **ctx.params)
  File "/home/takeokalab/anaconda3/envs/phy2/lib/python3.7/site-packages/click/core.py", line 555, in invoke
    return callback(*args, **kwargs)
  File "/home/takeokalab/anaconda3/envs/phy2/lib/python3.7/site-packages/click/decorators.py", line 17, in new_func
    return f(get_current_context(), *args, **kwargs)
  File "/home/takeokalab/anaconda3/envs/phy2/lib/python3.7/site-packages/phy/apps/__init__.py", line 158, in cli_template_gui
    template_gui(params_path, **kwargs)
  File "/home/takeokalab/anaconda3/envs/phy2/lib/python3.7/site-packages/phy/apps/template/gui.py", line 199, in template_gui
    controller = TemplateController(model=load_model(params_path), dir_path=dir_path, **kwargs)
  File "/home/takeokalab/anaconda3/envs/phy2/lib/python3.7/site-packages/phylib/io/model.py", line 1181, in load_model
    return TemplateModel(**get_template_params(params_path))
  File "/home/takeokalab/anaconda3/envs/phy2/lib/python3.7/site-packages/phylib/io/model.py", line 1164, in get_template_params
    params = read_python(params_path)
  File "/home/takeokalab/anaconda3/envs/phy2/lib/python3.7/site-packages/phylib/utils/_misc.py", line 171, in read_python
    contents = path.read_text()
  File "/home/takeokalab/anaconda3/envs/phy2/lib/python3.7/pathlib.py", line 1217, in read_text
    return f.read()
  File "/home/takeokalab/anaconda3/envs/phy2/lib/python3.7/codecs.py", line 322, in decode
    (result, consumed) = self._buffer_decode(data, self.errors, final)
UnicodeDecodeError: 'utf-8' codec can't decode byte 0x89 in position 0: invalid start byte

[Cyrille Rossant]

Hi

Do you use "phy kwik-gui myfile.kwik" to open the Kwik GUI? This error message seems to indicate that it tries to open the template GUI instead.

Cyrille

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[Mattia D'Andola]

kwik-gui works, thanks for the help.

Il giorno venerdì 24 gennaio 2020 14:21:42 UTC+1, Cyrille Rossant ha scritto:

Hi

Do you use "phy kwik-gui myfile.kwik" to open the Kwik GUI? This error message seems to indicate that it tries to open the template GUI instead.

Cyrille

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