I agree NoSQL API should be the future, using IndexedDB. I just found
pouchdb.com which provides an excellent API over IndexedDB and also
synchronization with remote CouchDB or PouchDB.
For now, it should be possible to use
http://nparashuram.com/IndexedDBShim/ to get the IndexedDB API over
either the built-in WebSQL or the PG/Cordova SQLiteAPI. I have already
been able to build and run the Android version of the plugin with
SQLCipher (encryption) and will be working on running the iOS version
over sqlcipher.
Chris
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