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Where is the raw data of UKBB-TOPmed

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Jordi Valls

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Dec 12, 2024, 12:40:14 PM12/12/24
to PheWeb-UMich
Dear all,

I have a question about where is the raw summary statistics of UKBB-TOPmed data since the Pheweb takes the 2000 most sginificative variants. 
The study has been perfromed with the same White British participants of the UK Biobank array? in both results of TopMED and HRC?



Sarah Gagliano Taliun

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Dec 12, 2024, 12:55:43 PM12/12/24
to PheWeb-UMich
Thank you for your interest in PheWeb. On the TOPMed-imputed UKBB PheWeb, the full summary statistics are available on the Manhattan page for each trait on the top right hand corner by clicking on the "Download Summary Statistics" button. Yes, the GWAS analyses (for both the TOPMed-imputed UKBB PheWeb and HRC-imputed UKBB PheWeb) were performed on the White British subset of participants.
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