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Tamás Olasz
,
Hammond, Glenn E
4
Jul 10
UFD_DECAY not working with CHEMISTRY
Dear Glenn, thank you for your answer. I understand that UFD_DECAY uses the data structure of the
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UFD_DECAY not working with CHEMISTRY
Dear Glenn, thank you for your answer. I understand that UFD_DECAY uses the data structure of the
Jul 10
Zafar Iqbal Zafar
Jul 8
H2(Ox) in Surrogate_model
Greetings, While trying to model a simple homogenized cuboid (0.2 x 0.2 x 4.0) with its one face
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H2(Ox) in Surrogate_model
Greetings, While trying to model a simple homogenized cuboid (0.2 x 0.2 x 4.0) with its one face
Jul 8
reisi...@gmail.com
, …
Michael Nole
42
Jul 8
Simulation failes
Thank you very much Glenn, and Michael for your help. I will try it. On Tue, Jul 8, 2025 at 1:40 PM
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Simulation failes
Thank you very much Glenn, and Michael for your help. I will try it. On Tue, Jul 8, 2025 at 1:40 PM
Jul 8
gerard lods
,
Hammond, Glenn E
4
Jul 8
ERROR: Keyword "UPDATE_PERMEABLITY" not recognized in CHEMISTRY
No worries. This happens to me all the time. Thank goodness for error messaging! Glenn From: '
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ERROR: Keyword "UPDATE_PERMEABLITY" not recognized in CHEMISTRY
No worries. This happens to me all the time. Thank goodness for error messaging! Glenn From: '
Jul 8
Izuto Takimoto
,
Hammond, Glenn E
2
Jul 8
Convergence issues during precipitation
Izuto, When I run the input deck that you sent, I see SiO2(am) precipitating on the inlet end of the
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Convergence issues during precipitation
Izuto, When I run the input deck that you sent, I see SiO2(am) precipitating on the inlet end of the
Jul 8
Hammond, Glenn E
Jul 8
Re: [pflotran-users: 8459] Script for Automating multiple Runs
Fatemeh, I am unsure if I replied to this email. I would mimic what is done with DBASE https://
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Re: [pflotran-users: 8459] Script for Automating multiple Runs
Fatemeh, I am unsure if I replied to this email. I would mimic what is done with DBASE https://
Jul 8
Tong Guo
, …
Gérard Lods
5
Jul 4
Permeability not evolving during the simulation
Hi, I have an ERROR with varying permeability : CHEMISTERY ... UPDATE_PERMEABLITY ! ERROR: Keyword
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Permeability not evolving during the simulation
Hi, I have an ERROR with varying permeability : CHEMISTERY ... UPDATE_PERMEABLITY ! ERROR: Keyword
Jul 4
Kumar, Girish
, …
Girish Kumar
5
Jul 3
RE: ERROR(0): Uninitialized material id in patch at cell 1
Ahh...makes sense! Thanks for clarifying, Glenn. Regards, Girish On Wednesday, July 2, 2025 at 12:26:
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RE: ERROR(0): Uninitialized material id in patch at cell 1
Ahh...makes sense! Thanks for clarifying, Glenn. Regards, Girish On Wednesday, July 2, 2025 at 12:26:
Jul 3
Bisesh Joshi
, …
Hammond, Glenn E
3
Jul 2
Using log K values for dissolution of Ferrihydrite and Goethite in model
Bisesh, The logKs in the hanford.dat database originate the EQ3/6 database: https://documentation.
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Using log K values for dissolution of Ferrihydrite and Goethite in model
Bisesh, The logKs in the hanford.dat database originate the EQ3/6 database: https://documentation.
Jul 2
Sanskriti Shindadkar
,
Hammond, Glenn E
2
Jul 2
Issues with Regression Tests, and some inputs
Sanskriti, For those tutorials, you need to run OpenGoSim's version of PFLOTRAN. See https://docs
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Issues with Regression Tests, and some inputs
Sanskriti, For those tutorials, you need to run OpenGoSim's version of PFLOTRAN. See https://docs
Jul 2
Zhongkang Yan
,
Hammond, Glenn E
5
Jun 25
How should the local infiltration conditions be set
Glenn, Thank you for your timely reply. I adjusted the input file according to your suggestion and
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How should the local infiltration conditions be set
Glenn, Thank you for your timely reply. I adjusted the input file according to your suggestion and
Jun 25
Yiwei Cai
,
Hammond, Glenn E
2
Jun 24
Mineral Species Definition in PFLOTRAN Database
Yiwei, Mineral reactions in the database may contain secondary aqueous species (complexes) or gases
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Mineral Species Definition in PFLOTRAN Database
Yiwei, Mineral reactions in the database may contain secondary aqueous species (complexes) or gases
Jun 24
Adam Haynes
, …
Hammond, Glenn E
6
Jun 23
ERROR: For flow condition "X" dataset "pressure", the number of times is excessive for synchronization with waypoints
Adam, The total runtime of the simulation is 10 years or 87599 hours. PFLOTRAN prints the error
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ERROR: For flow condition "X" dataset "pressure", the number of times is excessive for synchronization with waypoints
Adam, The total runtime of the simulation is 10 years or 87599 hours. PFLOTRAN prints the error
Jun 23
Zhuoran Du
,
Hammond, Glenn E
3
Jun 23
Inquiry on Boundary Condition Settings in GENERAL Mode
Dear Glenn, Thank you very much for your helpful suggestions and for taking the time to look into my
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Inquiry on Boundary Condition Settings in GENERAL Mode
Dear Glenn, Thank you very much for your helpful suggestions and for taking the time to look into my
Jun 23
Hammond, Glenn E
,
Marino V. Zuccolini
2
Jun 20
Re: [PFLOTRAN] Stochastic --multi_realization option
Glenn, thank you this a perfect point to start and we will proceed allowing the two options to be
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Re: [PFLOTRAN] Stochastic --multi_realization option
Glenn, thank you this a perfect point to start and we will proceed allowing the two options to be
Jun 20
Adam Haynes
, …
Mills, Richard Tran
10
Jun 20
Surface flow work arounds
Hi Folks, Hopefully this isn't too tangential as to be hijacking this thread, but I have a
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Surface flow work arounds
Hi Folks, Hopefully this isn't too tangential as to be hijacking this thread, but I have a
Jun 20
Bisesh Joshi
,
Hammond, Glenn E
5
Jun 18
Queries on simulating SOM decomposition in aerobic and anaerobic conditions
Thanks Glenn. Can you please share any similar reaction sandbox file if you have one? Best regards,
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Queries on simulating SOM decomposition in aerobic and anaerobic conditions
Thanks Glenn. Can you please share any similar reaction sandbox file if you have one? Best regards,
Jun 18
reisi...@gmail.com
,
Hammond, Glenn E
3
Jun 11
Constraint-CONCENTRATIONS
Thank you very much for the information! On Wed, Jun 11, 2025 at 11:51 'Hammond, Glenn E' via
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Constraint-CONCENTRATIONS
Thank you very much for the information! On Wed, Jun 11, 2025 at 11:51 'Hammond, Glenn E' via
Jun 11
Anne Schulz
,
Eduardo Basurto
4
Jun 6
Anisotropy of thermal conductivity
No problem, let me know if this resolves it, otherwise I can look over your input deck. -Eddie On
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Anisotropy of thermal conductivity
No problem, let me know if this resolves it, otherwise I can look over your input deck. -Eddie On
Jun 6
Won Woo Yoon
, …
laurin76....@gmail.com
10
Jun 6
PFLOTRAN MPI Initialization Error with HDF5
Hi Glenn, The hdf5 version of petsc 2.20.0 seems to be hdf5-1.12.2. I just sent the configure.log.
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PFLOTRAN MPI Initialization Error with HDF5
Hi Glenn, The hdf5 version of petsc 2.20.0 seems to be hdf5-1.12.2. I just sent the configure.log.
Jun 6
juntao pan
,
Hammond, Glenn E
5
Jun 5
Boundary condition for gas migration
Hi Glenn, Thank you very much! Now I have a beeter understanding of this problem. Juntao 在2025年6月5日星期
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Boundary condition for gas migration
Hi Glenn, Thank you very much! Now I have a beeter understanding of this problem. Juntao 在2025年6月5日星期
Jun 5
Peter Alt-Epping
,
Hammond, Glenn E
3
Jun 5
Error in multiple file HDF5 output
Hi Glenn, Thanks for looking into this. Please find the >git -log -1 output and the OUTPUT Block
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Error in multiple file HDF5 output
Hi Glenn, Thanks for looking into this. Please find the >git -log -1 output and the OUTPUT Block
Jun 5
juntao pan
,
Hammond, Glenn E
2
Jun 4
Two kinds of gases in general mode
PFLOTRAN does not support mixtures of gas component (ie, > 1 gas component) on the flow side. The
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Two kinds of gases in general mode
PFLOTRAN does not support mixtures of gas component (ie, > 1 gas component) on the flow side. The
Jun 4
Andrea Perri
,
Hammond, Glenn E
2
Jun 3
ERROR: SFDefaultSaturation is a dummy routine used for saturated flow only.
Andrea, You are running RICHARDS mode, which will allow for drainage (liquid saturations below 1).
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ERROR: SFDefaultSaturation is a dummy routine used for saturated flow only.
Andrea, You are running RICHARDS mode, which will allow for drainage (liquid saturations below 1).
Jun 3
Hammond, Glenn E
,
Seunghwan Baek
3
May 29
Configuring PETSc 3.21.X on MacOS Sequoia 15.4.X
Seunghwan, I never perform 'make check' with PETSc or build the PETSc example problems. It is
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Configuring PETSc 3.21.X on MacOS Sequoia 15.4.X
Seunghwan, I never perform 'make check' with PETSc or build the PETSc example problems. It is
May 29
Ondrej Mikláš
,
Leone, Rosie
3
May 21
aperture in SECONDARY_CONTINUUM
Thanks Rosie, after the EPSILON conversion you suggested, my model accepts also dataset. Ondrej On
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aperture in SECONDARY_CONTINUUM
Thanks Rosie, after the EPSILON conversion you suggested, my model accepts also dataset. Ondrej On
May 21
Won Woo Yoon
,
Hammond, Glenn E
3
May 20
Implementing heterogeneous mineral distributions in PFLOTRAN
Dear Glenn, Thanks for your kind response. I was able to run the simulation successfully after
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Implementing heterogeneous mineral distributions in PFLOTRAN
Dear Glenn, Thanks for your kind response. I was able to run the simulation successfully after
May 20
Bex Abylkhani
,
Hammond, Glenn E
4
May 13
Residual vectors and Jacobian matrices for coupled systems
Bex, Please give the attached input file that includes the correct debugging block a try: DEBUG
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Residual vectors and Jacobian matrices for coupled systems
Bex, Please give the attached input file that includes the correct debugging block a try: DEBUG
May 13
Susan Pit
,
Hammond, Glenn E
3
May 13
Microbial reaction rate output
Susan, PFLOTRAN does not store the rates for microbial reactions (or to my recollection other
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Microbial reaction rate output
Susan, PFLOTRAN does not store the rates for microbial reactions (or to my recollection other
May 13
PEGGY NGUYEN
,
Hammond, Glenn E
2
May 7
Reaction Sandbox for Electrochemical Fenton-Like System
Peggy, Before choosing a reaction in PFLOTRAN, you will need to decide whether the reaction is
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Reaction Sandbox for Electrochemical Fenton-Like System
Peggy, Before choosing a reaction in PFLOTRAN, you will need to decide whether the reaction is
May 7