We just released a 2.02 of percolator, which is available from
https://github.com/percolator/percolator/downloads
Most of the changes are bug fixes and streamlining of the build
process. An extract of the change log is attached below.
Best Regards
-José and Lukas
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v2.02* Added three new parameters in percolator, "exp-mass",
"empirical-protein-q" and "protein-level-pi0".
* Added new xml binary serialization schemes in Sqt2pin. It now
supports LevelDB + XDR and Boost Serialization + Hash tables.
* Added output of PEP by default in percolator.* Bugfix: fixed sqt2pin
to accept extra characters in the peptides of the input files.* Remove
some external dependencies and/or libraries.* Added support to OS-X
systems.* Bugfix: Compilation error of sqt2pin in some platforms.
* Removed warnings in the building process.* Added cross compilation
compatibility with Ubuntu-Debian systems (MinGW).* Improved the
building and compilation process.* Added parameter -M to activate the
exp_mass in the ouput of percolator.* Bugfix: Execution error while
creating temporal directories in sqt2pin fixed.* Created a patch for
XSD binaries libraries in MAC.* Created a patch for XDR serialization
in Windows.* Added an adapted version for percolator of LevelDB and
TokyoCabinet libraries.* Generated packages for MAC,Ubuntu and Fedora
systems.* Generated installer of percolator,elude and sqt2pin for
windows systems.* Added GUI for installers in Windows. Included icons,
language options as well as many add-ons.