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Alexandros Stamatakis

Sep 1

Machine Learning for Evolutionary Genomics (Legend2025) abstract submission deadline: September 2022

Dear Users of our SW tools, Do you want to spend time in the French Alps and talk about Machine

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Machine Learning for Evolutionary Genomics (Legend2025) abstract submission deadline: September 2022

Dear Users of our SW tools, Do you want to spend time in the French Alps and talk about Machine

Sep 1

Emanuel Wyler, Vishnu Ashok3

Jul 17

Did not get download link after registering for PEAR academic

Hi Vishnu, I was contacted by Alexis shortly after my post, and he sent me a download link. Tell me

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Did not get download link after registering for PEAR academic

Hi Vishnu, I was contacted by Alexis shortly after my post, and he sent me a download link. Tell me

Jul 17

Alexandros Stamatakis

Jun 18

2nd Conference on Machine Learning for Evolutionary Genomics - French Alps

Dear Users of our Software Tools, Do you fancy spending some days in the French Alps in December and

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2nd Conference on Machine Learning for Evolutionary Genomics - French Alps

Dear Users of our Software Tools, Do you fancy spending some days in the French Alps in December and

Jun 18

Alexandros Stamatakis

Mar 26

Workshop on Biodiversity Genomics in Crete - May 2025

Dear Users of our software tools, Are you looking for a good excuse to visit Crete? Join us for the

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Workshop on Biodiversity Genomics in Crete - May 2025

Dear Users of our software tools, Are you looking for a good excuse to visit Crete? Join us for the

Mar 26

Alexandros Stamatakis

Mar 19

raxtax: a novel tool for taxonomic classification

Dear Users Check out raxtax, our new open-source tool for taxonomic classification of barcoding

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raxtax: a novel tool for taxonomic classification

Dear Users Check out raxtax, our new open-source tool for taxonomic classification of barcoding

Mar 19

Alexandros Stamatakis

Feb 24

LEGEND conference on Machine Learning for Evolutionary Genomics Data - French Alps - Dec 8-12 2025

Dear Users of our tools, The second edition of our LEGEND conference on Machine Learning for

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LEGEND conference on Machine Learning for Evolutionary Genomics Data - French Alps - Dec 8-12 2025

Dear Users of our tools, The second edition of our LEGEND conference on Machine Learning for

Feb 24

Alexandros Stamatakis

10/21/24

Applications for 2025 computational molecular evolution summer school close in 10 days

Dear Users of our software tools, Applications are still open for the 2025 school on computational

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Applications for 2025 computational molecular evolution summer school close in 10 days

Dear Users of our software tools, Applications are still open for the 2025 school on computational

10/21/24

Alexandros Stamatakis

10/8/24

Applications for 2025 computational molecular evolution summer school close in 3 weeks

Dear Users of our software tools, Applications are still open for the 2025 school on computational

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Applications for 2025 computational molecular evolution summer school close in 3 weeks

Dear Users of our software tools, Applications are still open for the 2025 school on computational

10/8/24

Alexandros Stamatakis

9/17/24

Registrations for 2025 computational molecular evolution summer school are open

Dear Users of our software tools, Registrations are open for the 2025 school on computational

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Registrations for 2025 computational molecular evolution summer school are open

Dear Users of our software tools, Registrations are open for the 2025 school on computational

9/17/24

9/12/24

Trimming unmatched sequence on 3' end of reads

Hi, I have just run PEAR on my data which had a fragment length shorter than the read length. I had

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Trimming unmatched sequence on 3' end of reads

Hi, I have just run PEAR on my data which had a fragment length shorter than the read length. I had

9/12/24

Alexandros Stamatakis

8/7/24

Registrations for 2025 computational molecular evolution summer school are open

Dear Users of our software tools, Registrations are open for the 2025 school on computational

unread,

Registrations for 2025 computational molecular evolution summer school are open

Dear Users of our software tools, Registrations are open for the 2025 school on computational

8/7/24

7/9/24

PEAR installation on M1 Mac

Hello, I am trying to install PEAR on my M1 Macbook Pro (Sonoma 14.2.1). I've managed to download

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PEAR installation on M1 Mac

Hello, I am trying to install PEAR on my M1 Macbook Pro (Sonoma 14.2.1). I've managed to download

7/9/24

Walter Rosa, Андрей Сандлер2

6/28/24

Installing PEAR on Ubuntu 22.04

Hi, I was facing the same error, and was able to fix it by removing the INLINE keyword from function

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Installing PEAR on Ubuntu 22.04

Hi, I was facing the same error, and was able to fix it by removing the INLINE keyword from function

6/28/24

Alexandros Stamatakis

1/16/24

Crete May 2024 - Machine Learning for Evolutionary Genomics Data

Dear Users of our Software, Sorry for bothering you with some event advertisement again via this list

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Crete May 2024 - Machine Learning for Evolutionary Genomics Data

Dear Users of our Software, Sorry for bothering you with some event advertisement again via this list

1/16/24

12/5/23

set quality to zero when reads mismatch

Dear pear community, I'm merging amplicon sequencing data for validating mutations. I was advised

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set quality to zero when reads mismatch

Dear pear community, I'm merging amplicon sequencing data for validating mutations. I was advised

12/5/23

12/1/23

Autodata 3.40 Crack And Full Version 22

autodata 3.40 crack and full version 22 Download File https://t.co/a6GYiZgnns eebf2c3492

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Autodata 3.40 Crack And Full Version 22

autodata 3.40 crack and full version 22 Download File https://t.co/a6GYiZgnns eebf2c3492

12/1/23

12/1/23

Dhund - The Fog 2 Full Movie Hd 1080p Free Download Utorrent

Dhund - The Fog 2 full movie hd 1080p free download utorrent Download https://t.co/gh0kYEWKt6

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Dhund - The Fog 2 Full Movie Hd 1080p Free Download Utorrent

Dhund - The Fog 2 full movie hd 1080p free download utorrent Download https://t.co/gh0kYEWKt6

12/1/23

Alexandros Stamatakis

11/15/23

Two weeks remaining to apply for 2024 Summer School on Computational Molecular Evolution

Dear Users of our software tools, The deadline for applications to our 14th summer school on

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Two weeks remaining to apply for 2024 Summer School on Computational Molecular Evolution

Dear Users of our software tools, The deadline for applications to our 14th summer school on

11/15/23

Alexandros Stamatakis

10/26/23

Applications for 2024 Summer School on Computational Molecular Evolution are open

Dear Users of our software tools, The applications for our 14th summer school on COmputational

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Applications for 2024 Summer School on Computational Molecular Evolution are open

Dear Users of our software tools, The applications for our 14th summer school on COmputational

10/26/23

Yuko Nakano, Amy Slender2

9/21/23

unrecognized option -- f

Hi Yuko, This issue was posted a while ago but I'm having the same issue and I have the solution

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unrecognized option -- f

Hi Yuko, This issue was posted a while ago but I'm having the same issue and I have the solution

9/21/23

Stephan Bitterwolf

8/21/23

Installing PEAR on Apple Silicon (M1 or M2 running Ventura)

If you are reading this post you probably ran into an issue installing PEAR on your apple silicon

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Installing PEAR on Apple Silicon (M1 or M2 running Ventura)

If you are reading this post you probably ran into an issue installing PEAR on your apple silicon

8/21/23

Rob Weeks, … Stephan Bitterwolf6

8/21/23

Pear installation MI MBPro macOS Monterey

Hi All, I just wanted to add to this thread since I had the same issue on the new M2 mac and could

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Pear installation MI MBPro macOS Monterey

Hi All, I just wanted to add to this thread since I had the same issue on the new M2 mac and could

8/21/23

8/10/23

-p function doesn't work

I change -p to different value but the result seems contains same. does somebody find the same

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-p function doesn't work

I change -p to different value but the result seems contains same. does somebody find the same

8/10/23

8/8/23

PEAR Mac Installation Issues

Hello, I am currently trying to install PEAR onto my Macbook (macOS Monterey 12.0) and am running

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PEAR Mac Installation Issues

Hello, I am currently trying to install PEAR onto my Macbook (macOS Monterey 12.0) and am running

8/8/23

8/7/23

PEAR Install problem

1. I don't receive the installation email after I finish the table of academic use. 2. /Library/

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PEAR Install problem

1. I don't receive the installation email after I finish the table of academic use. 2. /Library/

8/7/23

Alexandros Stamatakis

7/11/23

One PostDoc Positions in my new research group in Crete

Dear Users of our Software, Please accept my apologies that I am slightly misusing our software

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One PostDoc Positions in my new research group in Crete

Dear Users of our Software, Please accept my apologies that I am slightly misusing our software

7/11/23

6/15/23

merging paired ends with their length larger than twice of single end

Hi, I am wondering how should I tell Pear that my reads my have no overlap. They are mainly of Case B

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merging paired ends with their length larger than twice of single end

Hi, I am wondering how should I tell Pear that my reads my have no overlap. They are mainly of Case B

6/15/23

Chance Noffsinger2

6/8/23

Install on macOS Big Sur version 11.6

fixed by following this: https://stackoverflow.com/questions/33278928/how-to-overcome-aclocal-1-15-is

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Install on macOS Big Sur version 11.6

fixed by following this: https://stackoverflow.com/questions/33278928/how-to-overcome-aclocal-1-15-is

6/8/23

5/11/23

running multiple samples at once

Is there a way to run multiple samples through PEAR at the same time? I plan on demultiplexing my

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running multiple samples at once

Is there a way to run multiple samples through PEAR at the same time? I plan on demultiplexing my

5/11/23

Hannah Vollmer, … Thomas Flouris7

5/5/23

no such file or directory: ./pear

Yes, I mean it was just returning the pear options. But now it's working! This was the sweet spot

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no such file or directory: ./pear

Yes, I mean it was just returning the pear options. But now it's working! This was the sweet spot

5/5/23

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