SyntaxError: unexpected character after line continuation character

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ANUBHAB KHAN

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Apr 2, 2018, 6:24:15 PM4/2/18
to PartitionFinder
Hey,

I get the following error when I try to run partition finder.

python /Users/babypie/Downloads/partitionfinder-2.1.1/partition_finder.cfg /Users/babypie/Documents/References/PhD/stanford/mitogenome 

  File "/Users/babypie/Downloads/partitionfinder-2.1.1/partition_finder.cfg", line 21

    ND1_pos1 = 3873-4828\3;

                          ^

SyntaxError: unexpected character after line continuation character



can someone please help. I am using partitionfinder-2.1.1  on a mac

The .cfg file is attached.

thanks

partition_finder.cfg

Rob Lanfear

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Apr 2, 2018, 6:28:02 PM4/2/18
to PartitionFinder
Hi Anubhab,

To run PartitionFinder you need to point it to the executable script. Right now you are pointing python to a .cfg file instead.

Please follow the instructions that start on page 8 of the manual.

Yours,

Rob
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