Hi! Sorry for the delay in replying; I had somehow missed this email!
You should be able to find a script file with the name `Whisper.praat` in the Praat plugin folder. If you know the path, you can pass that to `parselmouth.praat.run_file(sound, "the/path/of/the/plugin's/Whisper.praat")`.
I've looked into actually loading extensions into Parselmouth, but Praat crashed (and it would also do that in "batch mode" from the command line; so there's not a lot Parselmouth can do about it).
So, translating their workaround to Parselmouth, you should go through `parselmouth.praat.run_file` :-)
If this somehow doesn't work, please let me know!