I don't believe so. your best bet would probably be a flake8-specific contrib task/backend that you could layer in alongside or instead of checkstyle.
an alternative, but cruder approach might be to leverage a pytest plugin. theoretically, you could inject something like
https://pypi.python.org/pypi/pytest-flake8 into the test chroot and then pass the requisite args to trigger that in pytest via either passthru args (`./pants test <target> -- -vvs --flake8` etc) or by setting the `--test-pytest-options` option in your repo-specific pants.ini. resolving the todo
here would unblock a path to test dep injection more generally.