Prection over a sequence

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Mesut Ünal

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May 2, 2023, 12:22:13 AM5/2/23
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Hi Jian,

In addition to my previous message about training orca with our cool files, I would also like to see the results of using the sequence we produce. I'm using the command from the README

`outputs = orca_predict.genomepredict(Genome.sequence_to_encoding(sequence)[None,:,:], chrom, mpos=pos, wpos=wpos, use_cuda=True)`

Could you please clarify what mpos is? The explanation on the API isn't clear enough for me. When I implement a sequence here, whose lenght is 1176803, I receive the error
```
output["start_coords"] = [wpos - 16000000 + s * 4000 for s in allstarts[0]]
IndexError: list index out of range
```
I'd appreciate your help on this issue.

Best,
Mesut
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