error installing sampy

[mathias....@gmail.com]

Hi,

after I've overcome the bwa issue I outlined in another thread it took me some time to install sampy. The install script creates a temporary directory in a path containing several subdirectiories. One of them is called lib but later it tries to create files in a folder called lib64. After redirecting the script using a link everything went smooth. I'm only writing to report this bug. You may want to update the installation script.

Mathias

[Márton Münz]

Hi Mathias,

 

Thanks very much for your comment!

We are aware of a potential issue in Pysam installation: on certain systems the Pysam installation directory is set to 'lib64' instead of the usual 'lib'. This will be fixed in an update very soon by altering the install_pysam.py script. 

 How did you implement your fix?

 

Many thanks,

Márton

[nealc...@gmail.com]

Hi Mathias,

I would really like to know how you did this, if you have time to share.

Thanks,

Neal