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Adding default reference genome ...
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NOTE: the reference genome is being indexed by BWA and Stampy that will take a while.
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OpEx: Indexing genome by BWA
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./index_genome.sh: line 11: tools/bwa-0.5.10/bwa: No such file or directory
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OpEx: Indexing genome by Stampy
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Could not import the maptools module -- does the maptools.so library exist?
Traceback (most recent call last):
File "tools/stampy-1.0.14.1/stampy.py", line 14, in <module>
import maptools
ImportError: No module named maptools
Could not import the maptools module -- does the maptools.so library exist?
Traceback (most recent call last):
File "tools/stampy-1.0.14.1/stampy.py", line 14, in <module>
import maptools
ImportError: No module named map tools
Can anyone help me to solve this issue?I am very new to bioinformatics so I apologize if my question is too basic for all of you. I really appreciate your kind help.
Thanks
Nizam