OpEx User Group

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Welcome to the OpEx User Group - a forum for discussing bug-reports, feature requests, suggestions or any issues related to OpEx.

The OpEx (Optimised Exome) pipeline has been developed through a collaboration between the Institute of Cancer Research and the Wellcome Trust Centre for Human Genetics. It includes a fixed implementation of read mapping, quality control, variant calling and annotation tools optimised for individual or multiple exome sequencing analysis in the research or clinical setting.

You can download the latest version of the pipeline and detailed documentation from 

Please post any questions, feature-requests, bug-reports, comments here or send any feedback to opex-user-group@googlegroups.com. Thank you!