I'm sorry that you feel that OpenVSP has a horrendous UI. Do you have any constructive suggestions to improve it? Most OpenVSP users much prefer it to CAD or other ways of modeling an aircraft.
Many people asking for help wouldn't start by trashing the tool to the primary developer. You do you though.
Was the airfoil in the CAD anything in particular? Aerospace engineers don't generally just draw horrendous airfoils in CAD and then treat them as gospel. We also usually stay away from horrendous airfoils on horrendous airplanes.
You will find a collection of thousands of airfoils on the
UIUC Airfoil Data Site. OpenVSP should read any of the files on that site. There are three formats typically used -- they usually represent both the top and bottom surface of an airfoil with about the same number of points -- and typically similar spacing. Many of the formats start at the trailing edge lower surface, wrap around the leading edge and then finish at the trailing edge upper surface -- but other formats do it differently.
Your airfoil looks to be about 16% thick and it has a flat bottom -- which is easy to build, or to model in horrendous CAD programs. But horrendous airfoils drawn in horrendous CAD usually exhibit horrendous aerodynamic performance. The Clark Y is an old and popular airfoil that has a flat bottom, you might consider it. The NACA 4412 is a fairly close match to a Clark Y.
Your airfoil seems to be rotated such that the bottom surface is 'horizontal'. This can be accomplished with incidence or by modifying the airfoil. But it was probably just another arbitrary choice by a lazy CAD operator who didn't have a good reason to set the wing at any other angle. Usually, an airfoil's points are specified such that its 'natural' position has specific aerodynamic meaning -- though a very long time ago, airfoils would have been drawn with the flat bottom 'flat'. A wing's incidence is usually set based on the trim condition for the airplane -- the relative angle between the wing and the horizontal tail is called decalage, it matters.
You might try approximating your airfoil as a NACA 4416 to start. You could try the 4-digit modified or other airfoil types to get some more freedom to approximate your horrendous shape.
Running an aerodynamic analysis with the CG at 0,0,0 is OK. The CG is only used as a reference point for the moments. After the aerodynamic analysis is finished, you can easily re-compute the moments about any other point using statics. One common procedure is to run first with 0,0,0 and calculate the position of the neutral point. Then, you might set the CG about 10% of the chord in front of that location.
Rob