Supporting files for QIIME2

[monica steffi matchado]

Dear All,

I would like to try OTL as taxonomic classifier for my sets of datasets. I am familiar with QIIME2. For building my own taxonomic classifier, I need sequence file (in fasta format) and Taxa format from OTL. Any idea where can I get those?

[Karen Cranston]

Hi Monica,

I just replied over on the open github issue:

https://github.com/OpenTreeOfLife/opentree/issues/1245 

Short answer - I am not sure we have the data you need for qiime, because opentree does not use sequence data for any part of our pipeline. 

On Thu, Jul 16, 2020 at 7:11 AM monica steffi matchado <mail2...@gmail.com> wrote:

Dear All,

I would like to try OTL as taxonomic classifier for my sets of datasets. I am familiar with QIIME2. For building my own taxonomic classifier, I need sequence file (in fasta format) and Taxa format from OTL. Any idea where can I get those?

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