The epistemic uncertainties must be specified in the two .xml files. Please read the OQ documentation carefully (https://docs.openquake.org/oq-engine/manual/latest)
The uncertainties in your example can be modelled as described here:
https://github.com/gem/oq-engine/blob/master/openquake/qa_tests_data/logictree/case_36/source_model_logic_tree.xml
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