OQ on Redhat server

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Nima Dolatabadi

unread,
Jun 12, 2021, 4:45:46 AMJun 12
to OpenQuake Users
I have Anaconda installed on Redhat server and tring to run a calculcation. it goes all good on a Personal Linux but goes with following error on this server
I hope you can help me on this issue.
I runing with the code:
oq engine --run job.ini --exports=csv
Regards

[2021-06-11 19:08:15 #5 INFO] x_195029 running /home/x_195029/Fault.Based/Job/job.ini [--hc=None]
[2021-06-11 19:08:15 #5 INFO] Using engine version 3.11.0
[2021-06-11 19:08:16 #5 WARNING] Version v3.11.3 of the engine is available, but you are still using version 3.11.0
[2021-06-11 19:08:16 #5 WARNING] Using 32 cores on localhost.localdomain
[2021-06-11 19:08:16 #5 INFO] Validated source_model_logic_tree.xml in 0.01 seconds
[2021-06-11 19:08:16 #5 INFO] Checksum of the input files: 990994866
[2021-06-11 19:08:16 #5 INFO] Reading the risk model if present
[2021-06-11 19:08:16 #5 INFO] Inferring the hazard grid
[2021-06-11 19:08:16 #5 INFO] Read N=2107 hazard sites and L=20 hazard levels
[2021-06-11 19:08:17 #5 INFO] Total number of logic tree paths = 10
[2021-06-11 19:08:17 #5 INFO] Reading the source model(s) in parallel
[2021-06-11 19:08:19 #5 INFO] read_source_model   1% [33 submitted, 53 queued]
[2021-06-11 19:08:19 #5 INFO] read_source_model   2% [34 submitted, 52 queued]
[2021-06-11 19:08:19 #5 INFO] read_source_model   3% [35 submitted, 51 queued]
[2021-06-11 19:08:19 #5 INFO] read_source_model   4% [36 submitted, 50 queued]
[2021-06-11 19:08:19 #5 INFO] read_source_model   5% [37 submitted, 49 queued]
[2021-06-11 19:08:19 #5 INFO] read_source_model   6% [38 submitted, 48 queued]
[2021-06-11 19:08:19 #5 INFO] read_source_model   8% [39 submitted, 47 queued]
[2021-06-11 19:08:19 #5 INFO] read_source_model   9% [40 submitted, 46 queued]
[2021-06-11 19:08:19 #5 INFO] read_source_model  10% [41 submitted, 45 queued]
[2021-06-11 19:08:19 #5 INFO] read_source_model  11% [42 submitted, 44 queued]
[2021-06-11 19:08:20 #5 INFO] read_source_model  12% [43 submitted, 43 queued]
[2021-06-11 19:08:20 #5 INFO] read_source_model  13% [44 submitted, 42 queued]
[2021-06-11 19:08:20 #5 INFO] read_source_model  15% [45 submitted, 41 queued]
[2021-06-11 19:08:20 #5 INFO] read_source_model  16% [46 submitted, 40 queued]
[2021-06-11 19:08:20 #5 INFO] read_source_model  17% [47 submitted, 39 queued]
[2021-06-11 19:08:20 #5 INFO] read_source_model  18% [48 submitted, 38 queued]
[2021-06-11 19:08:20 #5 INFO] read_source_model  19% [49 submitted, 37 queued]
[2021-06-11 19:08:20 #5 INFO] read_source_model  20% [50 submitted, 36 queued]
[2021-06-11 19:08:20 #5 INFO] read_source_model  22% [51 submitted, 35 queued]
[2021-06-11 19:08:20 #5 INFO] read_source_model  23% [52 submitted, 34 queued]
[2021-06-11 19:08:20 #5 INFO] read_source_model  24% [53 submitted, 33 queued]
[2021-06-11 19:08:20 #5 INFO] read_source_model  25% [54 submitted, 32 queued]
[2021-06-11 19:08:20 #5 INFO] read_source_model  26% [55 submitted, 31 queued]
[2021-06-11 19:08:21 #5 INFO] read_source_model  27% [56 submitted, 30 queued]
[2021-06-11 19:08:21 #5 INFO] read_source_model  29% [57 submitted, 29 queued]
[2021-06-11 19:08:21 #5 INFO] read_source_model  30% [58 submitted, 28 queued]
[2021-06-11 19:08:21 #5 INFO] read_source_model  31% [59 submitted, 27 queued]
[2021-06-11 19:08:21 #5 INFO] read_source_model  32% [60 submitted, 26 queued]
[2021-06-11 19:08:21 #5 INFO] read_source_model  33% [61 submitted, 25 queued]
[2021-06-11 19:08:21 #5 INFO] read_source_model  34% [62 submitted, 24 queued]
[2021-06-11 19:08:21 #5 INFO] read_source_model  36% [63 submitted, 23 queued]
[2021-06-11 19:08:21 #5 INFO] read_source_model  37% [64 submitted, 22 queued]
[2021-06-11 19:08:21 #5 INFO] read_source_model  38% [65 submitted, 21 queued]
[2021-06-11 19:08:22 #5 INFO] read_source_model  39% [66 submitted, 20 queued]
[2021-06-11 19:08:22 #5 INFO] read_source_model  40% [67 submitted, 19 queued]
[2021-06-11 19:08:22 #5 INFO] read_source_model  41% [68 submitted, 18 queued]
[2021-06-11 19:08:22 #5 INFO] read_source_model  43% [69 submitted, 17 queued]
[2021-06-11 19:08:22 #5 INFO] read_source_model  44% [70 submitted, 16 queued]
[2021-06-11 19:08:22 #5 INFO] read_source_model  45% [71 submitted, 15 queued]
[2021-06-11 19:08:22 #5 INFO] read_source_model  46% [72 submitted, 14 queued]
[2021-06-11 19:08:22 #5 INFO] read_source_model  47% [73 submitted, 13 queued]
[2021-06-11 19:08:22 #5 INFO] read_source_model  48% [74 submitted, 12 queued]
[2021-06-11 19:08:22 #5 INFO] read_source_model  50% [75 submitted, 11 queued]
[2021-06-11 19:08:22 #5 INFO] read_source_model  51% [76 submitted, 10 queued]
[2021-06-11 19:08:22 #5 INFO] read_source_model  52% [77 submitted, 9 queued]
[2021-06-11 19:08:22 #5 INFO] read_source_model  53% [78 submitted, 8 queued]
[2021-06-11 19:08:22 #5 INFO] read_source_model  54% [79 submitted, 7 queued]
[2021-06-11 19:08:23 #5 INFO] read_source_model  55% [80 submitted, 6 queued]
[2021-06-11 19:08:23 #5 INFO] read_source_model  56% [81 submitted, 5 queued]
[2021-06-11 19:08:23 #5 INFO] read_source_model  58% [82 submitted, 4 queued]
[2021-06-11 19:08:23 #5 INFO] read_source_model  59% [83 submitted, 3 queued]
[2021-06-11 19:08:23 #5 INFO] read_source_model  60% [84 submitted, 2 queued]
[2021-06-11 19:08:23 #5 INFO] read_source_model  61% [85 submitted, 1 queued]
[2021-06-11 19:08:23 #5 INFO] read_source_model  62% [86 submitted, 0 queued]
[2021-06-11 19:08:23 #5 INFO] read_source_model  63% [86 submitted, 0 queued]
[2021-06-11 19:08:23 #5 INFO] read_source_model  65% [86 submitted, 0 queued]
[2021-06-11 19:08:23 #5 INFO] read_source_model  66% [86 submitted, 0 queued]
[2021-06-11 19:08:23 #5 INFO] read_source_model  67% [86 submitted, 0 queued]
[2021-06-11 19:08:23 #5 INFO] read_source_model  68% [86 submitted, 0 queued]
[2021-06-11 19:08:24 #5 INFO] read_source_model  69% [86 submitted, 0 queued]
[2021-06-11 19:08:24 #5 INFO] read_source_model  70% [86 submitted, 0 queued]
[2021-06-11 19:08:24 #5 INFO] read_source_model  72% [86 submitted, 0 queued]
[2021-06-11 19:08:24 #5 INFO] read_source_model  73% [86 submitted, 0 queued]
[2021-06-11 19:08:24 #5 INFO] read_source_model  74% [86 submitted, 0 queued]
[2021-06-11 19:08:24 #5 INFO] read_source_model  75% [86 submitted, 0 queued]
[2021-06-11 19:08:24 #5 INFO] read_source_model  76% [86 submitted, 0 queued]
[2021-06-11 19:08:24 #5 INFO] read_source_model  77% [86 submitted, 0 queued]
[2021-06-11 19:08:24 #5 INFO] read_source_model  79% [86 submitted, 0 queued]
[2021-06-11 19:08:24 #5 INFO] read_source_model  80% [86 submitted, 0 queued]
[2021-06-11 19:08:24 #5 INFO] read_source_model  81% [86 submitted, 0 queued]
[2021-06-11 19:08:24 #5 INFO] read_source_model  82% [86 submitted, 0 queued]
[2021-06-11 19:08:24 #5 INFO] read_source_model  83% [86 submitted, 0 queued]
[2021-06-11 19:08:24 #5 INFO] read_source_model  84% [86 submitted, 0 queued]
[2021-06-11 19:08:25 #5 INFO] read_source_model  86% [86 submitted, 0 queued]
[2021-06-11 19:08:25 #5 INFO] read_source_model  87% [86 submitted, 0 queued]
[2021-06-11 19:08:25 #5 INFO] read_source_model  88% [86 submitted, 0 queued]
[2021-06-11 19:08:25 #5 INFO] read_source_model  89% [86 submitted, 0 queued]
[2021-06-11 19:08:25 #5 INFO] read_source_model  90% [86 submitted, 0 queued]
[2021-06-11 19:08:25 #5 INFO] read_source_model  91% [86 submitted, 0 queued]
[2021-06-11 19:08:25 #5 INFO] read_source_model  93% [86 submitted, 0 queued]
[2021-06-11 19:08:25 #5 INFO] read_source_model  94% [86 submitted, 0 queued]
[2021-06-11 19:08:25 #5 INFO] read_source_model  95% [86 submitted, 0 queued]
[2021-06-11 19:08:25 #5 INFO] read_source_model  96% [86 submitted, 0 queued]
[2021-06-11 19:08:25 #5 INFO] read_source_model  97% [86 submitted, 0 queued]
[2021-06-11 19:08:25 #5 INFO] read_source_model  98% [86 submitted, 0 queued]
[2021-06-11 19:08:25 #5 INFO] read_source_model 100% [86 submitted, 0 queued]
[2021-06-11 19:08:26 #5 INFO] Mean time per core=0s, std=0.0s, min=0s, max=0s
[2021-06-11 19:08:26 #5 INFO] Received {'tot': '215.03 KB'} in 8 seconds
[2021-06-11 19:08:26 #5 INFO] There are 1 groups and 86 sources with len(et_ids)=1.00
[2021-06-11 19:08:26 #5 INFO] Checking the sources bounding box
[2021-06-11 19:08:27 #5 INFO] Requiring 3.22 MB for full ProbabilityMap of shape (10, 2107, 20)
[2021-06-11 19:08:27 #5 INFO] Requiring 3.22 MB for max ProbabilityMap of shape (10, 2107, 20)
[2021-06-11 19:08:27 #5 INFO] gzipping the input files
[2021-06-11 19:08:27 #5 INFO] Sending <SiteCollection with 2107/2107 sites>
[2021-06-11 19:08:36 #5 INFO] preclassical 100% [1 submitted, 0 queued]
[2021-06-11 19:08:36 #5 INFO] Received {0: '237.93 KB', 'calc_times': '4.25 KB', 'after': '15 B', 'before': '15 B'} in 0 seconds
[2021-06-11 19:08:36 #5 INFO] tot_weight=8_602_810, max_weight=53_767
[2021-06-11 19:08:36 #5 INFO] Sending 210 tasks
[2021-06-11 19:08:44 #5 INFO] classical   1% [35 submitted, 175 queued]
[2021-06-11 19:08:57 #5 INFO] classical   2% [37 submitted, 173 queued]
[2021-06-11 19:09:00 #5 INFO] classical   3% [39 submitted, 171 queued]
[2021-06-11 19:09:01 #5 INFO] classical   4% [41 submitted, 169 queued]
[2021-06-11 19:09:02 #5 INFO] classical   5% [43 submitted, 167 queued]
[2021-06-11 19:09:08 #5 INFO] classical   6% [45 submitted, 165 queued]
[2021-06-11 19:09:26 #5 INFO] classical   7% [47 submitted, 163 queued]
[2021-06-11 19:09:28 #5 INFO] classical   8% [49 submitted, 161 queued]
[2021-06-11 19:09:31 #5 INFO] classical   9% [51 submitted, 159 queued]
[2021-06-11 19:09:40 #5 INFO] classical  10% [53 submitted, 157 queued]
[2021-06-11 19:09:46 #5 INFO] classical  11% [56 submitted, 154 queued]
[2021-06-11 19:09:48 #5 INFO] classical  12% [58 submitted, 152 queued]
[2021-06-11 19:09:51 #5 INFO] classical  13% [60 submitted, 150 queued]
[2021-06-11 19:09:51 #5 INFO] classical  14% [62 submitted, 148 queued]
[2021-06-11 19:09:52 #5 INFO] classical  15% [64 submitted, 146 queued]
[2021-06-11 19:09:56 #5 INFO] classical  16% [66 submitted, 144 queued]
[2021-06-11 19:10:06 #5 INFO] classical  17% [68 submitted, 142 queued]
[2021-06-11 19:10:08 #5 INFO] classical  18% [70 submitted, 140 queued]
[2021-06-11 19:10:09 #5 INFO] classical  19% [72 submitted, 138 queued]
[2021-06-11 19:10:09 #5 INFO] classical  20% [74 submitted, 136 queued]
[2021-06-11 19:10:19 #5 INFO] classical  21% [77 submitted, 133 queued]
[2021-06-11 19:10:22 #5 INFO] classical  22% [79 submitted, 131 queued]
[2021-06-11 19:10:23 #5 INFO] classical  23% [81 submitted, 129 queued]
[2021-06-11 19:10:25 #5 INFO] classical  24% [83 submitted, 127 queued]
[2021-06-11 19:10:26 #5 INFO] classical  25% [85 submitted, 125 queued]
[2021-06-11 19:10:27 #5 INFO] classical  26% [87 submitted, 123 queued]
[2021-06-11 19:10:29 #5 INFO] classical  27% [89 submitted, 121 queued]
[2021-06-11 19:10:30 #5 INFO] classical  28% [91 submitted, 119 queued]
[2021-06-11 19:10:31 #5 INFO] classical  29% [93 submitted, 117 queued]
[2021-06-11 19:10:34 #5 INFO] classical  30% [95 submitted, 115 queued]
[2021-06-11 19:10:40 #5 INFO] classical  31% [98 submitted, 112 queued]
[2021-06-11 19:10:41 #5 INFO] classical  32% [100 submitted, 110 queued]
[2021-06-11 19:10:43 #5 INFO] classical  33% [102 submitted, 108 queued]
[2021-06-11 19:10:46 #5 INFO] classical  34% [104 submitted, 106 queued]
[2021-06-11 19:10:47 #5 INFO] classical  35% [106 submitted, 104 queued]
[2021-06-11 19:10:49 #5 INFO] classical  36% [108 submitted, 102 queued]
[2021-06-11 19:10:50 #5 INFO] classical  37% [110 submitted, 100 queued]
[2021-06-11 19:10:50 #5 INFO] classical  38% [112 submitted, 98 queued]
[2021-06-11 19:10:52 #5 INFO] classical  39% [114 submitted, 96 queued]
[2021-06-11 19:10:56 #5 INFO] classical  40% [116 submitted, 94 queued]
[2021-06-11 19:10:59 #5 INFO] classical  41% [119 submitted, 91 queued]
[2021-06-11 19:11:00 #5 INFO] classical  42% [121 submitted, 89 queued]
[2021-06-11 19:11:01 #5 INFO] classical  43% [123 submitted, 87 queued]
[2021-06-11 19:11:02 #5 INFO] classical  44% [125 submitted, 85 queued]
[2021-06-11 19:11:06 #5 INFO] classical  45% [127 submitted, 83 queued]
[2021-06-11 19:11:07 #5 INFO] classical  46% [129 submitted, 81 queued]
[2021-06-11 19:11:07 #5 INFO] classical  47% [131 submitted, 79 queued]
[2021-06-11 19:11:11 #5 INFO] classical  48% [133 submitted, 77 queued]
[2021-06-11 19:11:14 #5 INFO] classical  49% [135 submitted, 75 queued]
[2021-06-11 19:11:16 #5 INFO] classical  50% [137 submitted, 73 queued]
[2021-06-11 19:11:19 #5 INFO] classical  51% [140 submitted, 70 queued]
[2021-06-11 19:11:21 #5 INFO] classical  52% [142 submitted, 68 queued]
[2021-06-11 19:11:24 #5 INFO] classical  53% [144 submitted, 66 queued]
[2021-06-11 19:11:27 #5 INFO] classical  54% [146 submitted, 64 queued]
[2021-06-11 19:11:29 #5 INFO] classical  55% [148 submitted, 62 queued]
[2021-06-11 19:11:33 #5 INFO] classical  56% [150 submitted, 60 queued]
[2021-06-11 19:11:34 #5 INFO] classical  57% [152 submitted, 58 queued]
[2021-06-11 19:11:35 #5 INFO] classical  58% [154 submitted, 56 queued]
[2021-06-11 19:11:39 #5 INFO] classical  59% [156 submitted, 54 queued]
[2021-06-11 19:11:41 #5 INFO] classical  60% [158 submitted, 52 queued]
[2021-06-11 19:11:44 #5 INFO] classical  61% [161 submitted, 49 queued]
[2021-06-11 19:11:46 #5 INFO] classical  62% [163 submitted, 47 queued]
[2021-06-11 19:11:51 #5 INFO] classical  63% [165 submitted, 45 queued]
[2021-06-11 19:11:54 #5 INFO] classical  64% [167 submitted, 43 queued]
[2021-06-11 19:11:56 #5 INFO] classical  65% [169 submitted, 41 queued]
[2021-06-11 19:11:58 #5 INFO] classical  66% [171 submitted, 39 queued]
[2021-06-11 19:11:59 #5 INFO] classical  67% [173 submitted, 37 queued]
[2021-06-11 19:12:02 #5 INFO] classical  68% [175 submitted, 35 queued]
[2021-06-11 19:12:03 #5 INFO] classical  69% [177 submitted, 33 queued]
[2021-06-11 19:12:05 #5 INFO] classical  70% [179 submitted, 31 queued]
[2021-06-11 19:12:08 #5 INFO] classical  71% [182 submitted, 28 queued]
[2021-06-11 19:12:09 #5 INFO] classical  72% [184 submitted, 26 queued]
[2021-06-11 19:12:11 #5 INFO] classical  73% [186 submitted, 24 queued]
[2021-06-11 19:12:13 #5 INFO] classical  74% [188 submitted, 22 queued]
[2021-06-11 19:12:14 #5 INFO] classical  75% [190 submitted, 20 queued]
[2021-06-11 19:12:15 #5 INFO] classical  76% [192 submitted, 18 queued]
[2021-06-11 19:12:20 #5 INFO] classical  77% [194 submitted, 16 queued]
[2021-06-11 19:12:23 #5 INFO] classical  78% [196 submitted, 14 queued]
[2021-06-11 19:12:23 #5 INFO] classical  79% [198 submitted, 12 queued]
[2021-06-11 19:12:27 #5 INFO] classical  80% [200 submitted, 10 queued]
[2021-06-11 19:12:29 #5 INFO] classical  81% [203 submitted, 7 queued]
[2021-06-11 19:12:33 #5 INFO] classical  82% [205 submitted, 5 queued]
[2021-06-11 19:12:35 #5 INFO] classical  83% [207 submitted, 3 queued]
[2021-06-11 19:12:38 #5 INFO] classical  84% [209 submitted, 1 queued]
[2021-06-11 19:12:39 #5 INFO] classical  85% [210 submitted, 0 queued]
[2021-06-11 19:12:42 #5 INFO] classical  86% [210 submitted, 0 queued]
[2021-06-11 19:12:46 #5 INFO] classical  87% [210 submitted, 0 queued]
[2021-06-11 19:12:48 #5 INFO] classical  88% [210 submitted, 0 queued]
[2021-06-11 19:12:49 #5 INFO] classical  89% [210 submitted, 0 queued]
[2021-06-11 19:12:50 #5 INFO] classical  90% [210 submitted, 0 queued]
[2021-06-11 19:12:52 #5 INFO] classical  91% [210 submitted, 0 queued]
[2021-06-11 19:12:54 #5 INFO] classical  92% [210 submitted, 0 queued]
[2021-06-11 19:12:56 #5 INFO] classical  93% [210 submitted, 0 queued]
[2021-06-11 19:12:57 #5 INFO] classical  94% [210 submitted, 0 queued]
[2021-06-11 19:12:59 #5 INFO] classical  95% [210 submitted, 0 queued]
[2021-06-11 19:13:02 #5 INFO] classical  96% [210 submitted, 0 queued]
[2021-06-11 19:13:02 #5 INFO] classical  97% [210 submitted, 0 queued]
[2021-06-11 19:13:06 #5 INFO] classical  98% [210 submitted, 0 queued]
[2021-06-11 19:13:07 #5 INFO] classical  99% [210 submitted, 0 queued]
[2021-06-11 19:13:08 #5 INFO] classical 100% [210 submitted, 0 queued]
[2021-06-11 19:13:08 #5 INFO] Mean time per core=253s, std=8.2s, min=238s, max=267s
[2021-06-11 19:13:08 #5 INFO] Received {'pmap': '382.43 MB', 'rup_data': '149.5 KB', 'calc_times': '61.44 KB', 'extra': '21.54 KB'} in 271 seconds
[2021-06-11 19:13:08 #5 INFO] There are 10 realization(s)
[2021-06-11 19:13:08 #5 INFO] Storing by_task information
[2021-06-11 19:13:09 #5 INFO] Total number of contexts: 80_034
[2021-06-11 19:13:09 #5 INFO] Average number of sites per context: 803
[2021-06-11 19:13:09 #5 INFO] There were 2 slow tasks
[2021-06-11 19:13:09 #5 INFO] Building hazard statistics
[2021-06-11 19:13:09 #5 INFO] build_hazard   1% [33 submitted, 31 queued]
[2021-06-11 19:13:10 #5 INFO] build_hazard   3% [34 submitted, 30 queued]
[2021-06-11 19:13:10 #5 INFO] build_hazard   4% [35 submitted, 29 queued]
[2021-06-11 19:13:10 #5 INFO] build_hazard   6% [36 submitted, 28 queued]
[2021-06-11 19:13:10 #5 INFO] build_hazard   7% [37 submitted, 27 queued]
[2021-06-11 19:13:10 #5 INFO] build_hazard   9% [38 submitted, 26 queued]
[2021-06-11 19:13:10 #5 INFO] build_hazard  10% [39 submitted, 25 queued]
[2021-06-11 19:13:10 #5 INFO] build_hazard  12% [40 submitted, 24 queued]
[2021-06-11 19:13:11 #5 INFO] build_hazard  14% [41 submitted, 23 queued]
[2021-06-11 19:13:11 #5 INFO] build_hazard  15% [42 submitted, 22 queued]
[2021-06-11 19:13:11 #5 INFO] build_hazard  17% [43 submitted, 21 queued]
[2021-06-11 19:13:11 #5 INFO] build_hazard  18% [44 submitted, 20 queued]
[2021-06-11 19:13:11 #5 INFO] build_hazard  20% [45 submitted, 19 queued]
[2021-06-11 19:13:11 #5 INFO] build_hazard  21% [46 submitted, 18 queued]
[2021-06-11 19:13:11 #5 INFO] build_hazard  23% [47 submitted, 17 queued]
[2021-06-11 19:13:11 #5 INFO] build_hazard  25% [48 submitted, 16 queued]
[2021-06-11 19:13:11 #5 INFO] build_hazard  26% [49 submitted, 15 queued]
[2021-06-11 19:13:11 #5 INFO] build_hazard  28% [50 submitted, 14 queued]
[2021-06-11 19:13:11 #5 INFO] build_hazard  29% [51 submitted, 13 queued]
[2021-06-11 19:13:12 #5 INFO] build_hazard  31% [52 submitted, 12 queued]
[2021-06-11 19:13:12 #5 INFO] build_hazard  32% [53 submitted, 11 queued]
[2021-06-11 19:13:12 #5 INFO] build_hazard  34% [54 submitted, 10 queued]
[2021-06-11 19:13:12 #5 INFO] build_hazard  35% [55 submitted, 9 queued]
[2021-06-11 19:13:12 #5 INFO] build_hazard  37% [56 submitted, 8 queued]
[2021-06-11 19:13:12 #5 INFO] build_hazard  39% [57 submitted, 7 queued]
[2021-06-11 19:13:12 #5 INFO] build_hazard  40% [58 submitted, 6 queued]
[2021-06-11 19:13:12 #5 INFO] build_hazard  42% [59 submitted, 5 queued]
[2021-06-11 19:13:12 #5 INFO] build_hazard  43% [60 submitted, 4 queued]
[2021-06-11 19:13:12 #5 INFO] build_hazard  45% [61 submitted, 3 queued]
[2021-06-11 19:13:12 #5 INFO] build_hazard  46% [62 submitted, 2 queued]
[2021-06-11 19:13:13 #5 INFO] build_hazard  48% [63 submitted, 1 queued]
[2021-06-11 19:13:13 #5 INFO] build_hazard  50% [64 submitted, 0 queued]
[2021-06-11 19:13:13 #5 INFO] build_hazard  51% [64 submitted, 0 queued]
[2021-06-11 19:13:13 #5 INFO] build_hazard  53% [64 submitted, 0 queued]
[2021-06-11 19:13:13 #5 INFO] build_hazard  54% [64 submitted, 0 queued]
[2021-06-11 19:13:13 #5 INFO] build_hazard  56% [64 submitted, 0 queued]
[2021-06-11 19:13:13 #5 INFO] build_hazard  57% [64 submitted, 0 queued]
[2021-06-11 19:13:14 #5 INFO] build_hazard  59% [64 submitted, 0 queued]
[2021-06-11 19:13:14 #5 INFO] build_hazard  60% [64 submitted, 0 queued]
[2021-06-11 19:13:14 #5 INFO] build_hazard  62% [64 submitted, 0 queued]
[2021-06-11 19:13:14 #5 INFO] build_hazard  64% [64 submitted, 0 queued]
[2021-06-11 19:13:14 #5 INFO] build_hazard  65% [64 submitted, 0 queued]
[2021-06-11 19:13:14 #5 INFO] build_hazard  67% [64 submitted, 0 queued]
[2021-06-11 19:13:14 #5 INFO] build_hazard  68% [64 submitted, 0 queued]
[2021-06-11 19:13:14 #5 INFO] build_hazard  70% [64 submitted, 0 queued]
[2021-06-11 19:13:14 #5 INFO] build_hazard  71% [64 submitted, 0 queued]
[2021-06-11 19:13:14 #5 INFO] build_hazard  73% [64 submitted, 0 queued]
[2021-06-11 19:13:14 #5 INFO] build_hazard  75% [64 submitted, 0 queued]
[2021-06-11 19:13:15 #5 INFO] build_hazard  76% [64 submitted, 0 queued]
[2021-06-11 19:13:15 #5 INFO] build_hazard  78% [64 submitted, 0 queued]
[2021-06-11 19:13:15 #5 INFO] build_hazard  79% [64 submitted, 0 queued]
[2021-06-11 19:13:15 #5 INFO] build_hazard  81% [64 submitted, 0 queued]
[2021-06-11 19:13:15 #5 INFO] build_hazard  82% [64 submitted, 0 queued]
[2021-06-11 19:13:15 #5 INFO] build_hazard  84% [64 submitted, 0 queued]
[2021-06-11 19:13:15 #5 INFO] build_hazard  85% [64 submitted, 0 queued]
[2021-06-11 19:13:15 #5 INFO] build_hazard  87% [64 submitted, 0 queued]
[2021-06-11 19:13:15 #5 INFO] build_hazard  89% [64 submitted, 0 queued]
[2021-06-11 19:13:15 #5 INFO] build_hazard  90% [64 submitted, 0 queued]
[2021-06-11 19:13:15 #5 INFO] build_hazard  92% [64 submitted, 0 queued]
[2021-06-11 19:13:15 #5 INFO] build_hazard  93% [64 submitted, 0 queued]
[2021-06-11 19:13:16 #5 INFO] build_hazard  95% [64 submitted, 0 queued]
[2021-06-11 19:13:16 #5 INFO] build_hazard  96% [64 submitted, 0 queued]
[2021-06-11 19:13:16 #5 INFO] build_hazard  98% [64 submitted, 0 queued]
[2021-06-11 19:13:16 #5 INFO] build_hazard 100% [64 submitted, 0 queued]
[2021-06-11 19:13:16 #5 INFO] Mean time per core=0s, std=0.0s, min=0s, max=0s
[2021-06-11 19:13:16 #5 INFO] Received {'hcurves-rlzs': '4.2 MB', 'hcurves-stats': '1.7 MB', 'hmaps-rlzs': '1.14 MB', 'hmaps-stats': '492.54 KB'} in 7 seconds
[2021-06-11 19:13:16 #5 INFO] Saving hcurves-rlzs
[2021-06-11 19:13:16 #5 INFO] Saving hcurves-stats
[2021-06-11 19:13:16 #5 INFO] Saving hmaps-rlzs
[2021-06-11 19:13:16 #5 INFO] Saving hmaps-stats
[2021-06-11 19:13:17 #5 INFO] The maximum hazard map values are {'PGA': 1.1568587}
[2021-06-11 19:13:17 #5 INFO] Saving 1x2 mean hazard maps
[2021-06-11 19:13:17 #5 INFO] Received {} in 0 seconds
[2021-06-11 19:13:17 #5 CRITICAL] 
Traceback (most recent call last):
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/calculators/base.py", line 250, in run
    self.post_execute(self.result)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/calculators/classical.py", line 662, in post_execute
    self.calc_stats()
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/calculators/classical.py", line 740, in calc_stats
    for dic in smap:
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/parallel.py", line 575, in __iter__
    yield from self._iter()
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/parallel.py", line 546, in _iter
    val = result.get()
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/parallel.py", line 397, in get
    raise etype(msg)
RuntimeError: 
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/parallel.py", line 416, in new
    val = func(*args)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/parallel.py", line 484, in gen
    yield func(*args)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/calculators/classical.py", line 753, in make_hmap_png
    fig = plt.figure()
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/pyplot.py", line 533, in figure
    **kwargs)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/backend_bases.py", line 161, in new_figure_manager
    return cls.new_figure_manager_given_figure(num, fig)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/backend_bases.py", line 167, in new_figure_manager_given_figure
    canvas = cls.FigureCanvas(figure)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/backends/backend_qt5agg.py", line 24, in __init__
    super(FigureCanvasQTAgg, self).__init__(figure=figure)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/backends/backend_qt5.py", line 234, in __init__
    _create_qApp()
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/backends/backend_qt5.py", line 125, in _create_qApp
    raise RuntimeError('Invalid DISPLAY variable')
RuntimeError: Invalid DISPLAY variable
[2021-06-11 19:13:17 #5 CRITICAL] Traceback (most recent call last):
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/engine/engine.py", line 263, in run_calc
    calc.run(exports=exports, **kw)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/calculators/base.py", line 250, in run
    self.post_execute(self.result)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/calculators/classical.py", line 662, in post_execute
    self.calc_stats()
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/calculators/classical.py", line 740, in calc_stats
    for dic in smap:
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/parallel.py", line 575, in __iter__
    yield from self._iter()
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/parallel.py", line 546, in _iter
    val = result.get()
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/parallel.py", line 397, in get
    raise etype(msg)
RuntimeError: 
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/parallel.py", line 416, in new
    val = func(*args)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/parallel.py", line 484, in gen
    yield func(*args)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/calculators/classical.py", line 753, in make_hmap_png
    fig = plt.figure()
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/pyplot.py", line 533, in figure
    **kwargs)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/backend_bases.py", line 161, in new_figure_manager
    return cls.new_figure_manager_given_figure(num, fig)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/backend_bases.py", line 167, in new_figure_manager_given_figure
    canvas = cls.FigureCanvas(figure)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/backends/backend_qt5agg.py", line 24, in __init__
    super(FigureCanvasQTAgg, self).__init__(figure=figure)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/backends/backend_qt5.py", line 234, in __init__
    _create_qApp()
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/backends/backend_qt5.py", line 125, in _create_qApp
    raise RuntimeError('Invalid DISPLAY variable')
RuntimeError: Invalid DISPLAY variable

[2021-06-11 19:13:18 #5 INFO] Stopping the workers
Traceback (most recent call last):
  File "/home/x_195029/src/conda/bin/oq", line 11, in <module>
    sys.exit(oq())
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/commands/__main__.py", line 44, in oq
    sap.run(commands, prog='oq')
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/sap.py", line 225, in run
    return _run(parser(funcdict, **parserkw), argv)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/sap.py", line 216, in _run
    return func(**dic)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/commands/engine.py", line 164, in main
    run_jobs(job_inis, log_level, log_file, exports, **pars)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/engine/engine.py", line 407, in run_jobs
    run_calc(*args)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/engine/engine.py", line 263, in run_calc
    calc.run(exports=exports, **kw)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/calculators/base.py", line 250, in run
    self.post_execute(self.result)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/calculators/classical.py", line 662, in post_execute
    self.calc_stats()
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/calculators/classical.py", line 740, in calc_stats
    for dic in smap:
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/parallel.py", line 575, in __iter__
    yield from self._iter()
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/parallel.py", line 546, in _iter
    val = result.get()
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/parallel.py", line 397, in get
    raise etype(msg)
RuntimeError: 
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/parallel.py", line 416, in new
    val = func(*args)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/baselib/parallel.py", line 484, in gen
    yield func(*args)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/openquake/calculators/classical.py", line 753, in make_hmap_png
    fig = plt.figure()
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/pyplot.py", line 533, in figure
    **kwargs)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/backend_bases.py", line 161, in new_figure_manager
    return cls.new_figure_manager_given_figure(num, fig)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/backend_bases.py", line 167, in new_figure_manager_given_figure
    canvas = cls.FigureCanvas(figure)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/backends/backend_qt5agg.py", line 24, in __init__
    super(FigureCanvasQTAgg, self).__init__(figure=figure)
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/backends/backend_qt5.py", line 234, in __init__
    _create_qApp()
  File "/home/x_195029/src/conda/lib/python3.7/site-packages/matplotlib/backends/backend_qt5.py", line 125, in _create_qApp
    raise RuntimeError('Invalid DISPLAY variable')
RuntimeError: Invalid DISPLAY variable

Michele Simionato

unread,
Jun 13, 2021, 11:54:46 PMJun 13
to OpenQuake Users
You have two possibilities:

1. in the .bashrc (assuming you are using bash) add a line 

     export MPLBACKEND=Agg
2. if that, does not work, simply uninstall the matplotlib package installed by conda. It is not needed by the engine.

HTH,

                 Michele

Nima Dolatabadi

unread,
Jun 16, 2021, 9:12:55 AMJun 16
to OpenQuake Users
Dear Mchele,
Your solution completely did the trick.
Thanks for your great help.

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