Hi manu,
yes, that's an artifact of using motion control Simulated3rdOrderControl.
https://github.com/openpnp/openpnp/wiki/GcodeAsyncDriver#gcodedriver-new-settings
On some controllers (Smoothie is one) the acceleration is not
reset to the configured default when you home the machine, so it
takes the last set acceleration from the simulated jerk. Which is
typically very small.

Adding M204 Sxxx to HOME_COMMAND is the right thing to do.
I'll add this to the Issues & Solutions suggestion for HOME_COMMAND.
_Mark
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