Problem with output window

48 views
Skip to first unread message

Nikita Egorov

unread,
Mar 9, 2023, 3:46:23 PM3/9/23
to opencasa_m...@googlegroups.com
Greetings! I've used OpenCASA on Windows 8 and Linux Ubuntu 22.10
systems and got the same results. I've used existing parameters on
test data from GitHub, and didn't get an output window on either
system. Besides, chemotaxis sure doesn't work correctly. I'm attaching
what I get. I tried previous ImageJ versions to no end.
Screenshot from 2023-03-09 20-20-18.png
Screenshot from 2023-03-09 20-19-00.png

jyaniz

unread,
Mar 10, 2023, 1:02:26 AM3/10/23
to Nikita Egorov, opencasa_m...@googlegroups.com
Dear Nikita,

In the morphometry module, you have to click on each sperm to get the
results. For the chemotaxis module, other colleagues can probably help
you better.

Best regards,

Jesús
--
Jesús Yániz Pérez de Albéniz
Catedrático de Universidad (Full Professor in Animal Science)
Dpto. Producción Animal y CC. de los Alimentos
Escuela Politécnica Superior de Huesca
Universidad de Zaragoza
Ctra. Cuarte s/n, 22071, Huesca
email: jya...@unizar.es
Phone: 34 974 239 312

jyaniz

unread,
Mar 10, 2023, 2:04:57 AM3/10/23
to OpenCASA Mailing List


-------- Mensaje Original --------
Asunto: Re: Problem with output window
Fecha: 2023-03-10 07:25
De: jyaniz <jya...@unizar.es>
Destinatario: Nikita Egorov <nikitaye...@gmail.com>

I'm not sure where the problem is then. I am using ImageJ 1.50i with
OpenCASA v2 on Windows 10 and the morphometry module works perfectly...

El 2023-03-10 07:11, Nikita Egorov escribió:
> I did click. Doesn't seem to happen anything.

Nikita Egorov

unread,
Mar 10, 2023, 10:48:46 AM3/10/23
to OpenCASA Mailing List
Maybe there's a problem with ImageJ standard settings (I download the official version)?
Or is there an incompatibility with the latest Java?
I don't get an output with any computer I tried, but it certainly looks like the plugin is working. It just can't display the results.
пятница, 10 марта 2023 г. в 10:04:57 UTC+3, jya...@unizar.es:

jyaniz

unread,
Mar 11, 2023, 1:13:08 AM3/11/23
to Nikita Egorov, OpenCASA Mailing List
Dear Nikita,

We also used the official version of ImageJ with standard settings, I
don't think this is the problem.
We used Java version 8, release 301, and works OK

All the best,

Jesús
> --
> You received this message because you are subscribed to the Google
> Groups "OpenCASA Mailing List" group.
> To unsubscribe from this group and stop receiving emails from it, send
> an email to opencasa_mailing...@googlegroups.com.
> To view this discussion on the web, visit
> https://groups.google.com/d/msgid/opencasa_mailinglist/e48509bb-f80d-4bbd-8f6d-2981f47729can%40googlegroups.com
> [1].
>
>
> Links:
> ------
> [1]
> https://urldefense.com/v3/__https://groups.google.com/d/msgid/opencasa_mailinglist/e48509bb-f80d-4bbd-8f6d-2981f47729can*40googlegroups.com?utm_medium=email&amp;utm_source=footer__;JQ!!D9dNQwwGXtA!RDkXlEWAsP2LOUaad8tciXnidZPK1JNVkV1MSU6-_jjVs05JVfjs2FACAa1ANuwzCskXZNQ6WweurAIYUchtukR3ZgE$
Reply all
Reply to author
Forward
0 new messages