From the Terminal window, type or copy-and-paste:
ps -A|grep PHD2
If it's running, the process ID will be at the left end. If nothing pops up, I have no idea what's going on.
To kill the process, type:
kill <process ID number>
To double-check if it's running again, just repeat. If it is, you have a launch agent starting it repeatedly. That's going to take a bit of effort to find.