You don't need to check your settings regarding the rotator - it was absolutely connected to PHD2. That's one of the reasons we insist that people submit their log files, the log files record what actually happened. As far as distinguishing between the ZWO cameras, open the gear connection dialog in PHD2 but don't connect anything. Just to the right of the camera selection drop-down list, there is an icon that looks like a branch - click on that and it will show you the details of what cameras are available for connection. If you can figure out which is the guide camera you want to use, select it. This should be a one-time operation, PHD2 will remember the choice. Of course, if the cameras aren't clearly identified, there's not much PHD2 can do. While you have the gear connection dialog open, click on 'more equipment', find the entry for the rotator, and change it to 'None'.
Bruce