CTSOC Bulletin
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Barry Smith
Oct 9, 2025, 10:12:36 AM (2 days ago) Oct 9
to Hogan William R, John Beverley, Federico Donato, Ali Hasanzadeh, alanrut...@gmail.com, Alec Sculley, Alexander Bartnik, Alexander Diehl, Anna Maria Masci, Anuwat Pengput, apta...@gmail.com, Austin Liebers, Bjoern Peters, bl...@u.northwestern.edu, Natalie Gazzo, Gregory DeFranco, Mathias, Chi Hua Lu, cristia...@gmail.com, Crystal Tomlin, damaya...@gmail.com, Diane Schwartz, William D., Elena Milivinti, Fabricio Rodrigues, Finn Wilson, ga.ub...@gmail.com, Giacomo De Colle, glfo...@gmail.com, Gloria Sanso, hector...@gmail.com, Hunter Clark, Jaron Cheung, Jinjun Xiong, Jonathan Vajda, jonmc...@gmail.com, Joshua Billig, Lauren Mabe, Lindsay Cowell, mark.p...@cbp.dhs.gov, Melissa Van Norden, Michael Rabenberg, Naveed Shah, Olivia Hobai, Peihong Xie, Peter Elkin, Rachel Mavrovich, Rachel Stephens, Ram Samudrala, Regina Hurley, Scheuermann, Richard (NIH/NLM) [E], Robert Krieter, Ross Koppel, Samuel Eskew, Sean Kindya, Sebastian Duesing, Skyler Resendez, sydney...@gmail.com, Timothy Murphy, tmp...@gmail.com, Wenjin J. Zheng, Werner Ceusters, Yongqun He, Zackary Falls, Yu Lin, Fabian Neuhaus, Janna Hastings, obo-d...@googlegroups.com, isaacs...@u.northwestern.edu, James Egan, L Bates-Rodriguez, daniel...@utoronto.ca, bfo-d...@googlegroups.com, semant...@googlegroups.com, ontolog-forum, Claudio Masolo, luca.b...@loa.istc.cnr.it, Stefano Borgo, iuris.mo...@unipd.it, Roberta Ferrario, Koslicki Kathrin, Richard Ohrbach, Sonia Sharma, Sam Border, Fabricio Henrique Rodrigues
Thank you all once again for your support for our CTSOC Kickoff meeting in Buffalo last month. One goal of CTSOC is to promote collaborations across CTSA hubs regarding development and application of ontologies.
One goal of CTSOC is to create an environment for CTSA-related ontologies that would be analogous to the OBO Foundry, for example in that all CTSOC ontologies would satisfy the OBO Foundry principles.
has been appointed Post-Doc in the UB CTSA informatics hub to support the achievement of this goal. He will be in touch with some of you to explore ways in which he can be of assistance in contributing to this goal.
With greetings
Barry
Barry
Asiyah Yu Lin
Oct 9, 2025, 10:00:03 PM (2 days ago) Oct 9
to STEFANO BORGO, Bjoern Peters, Barry Smith, William R Hogan, John Beverley, Federico Donato, Ali Hasanzadeh, alanrut...@gmail.com, Alec Sculley, Alexander Bartnik, Alexander Diehl, Anna Maria Masci, Anuwat Pengput, apta...@gmail.com, Austin Liebers, bl...@u.northwestern.edu, Natalie Gazzo, Gregory DeFranco, Mathias, Chi Hua Lu, cristia...@gmail.com, Crystal Tomlin, damaya...@gmail.com, Diane Schwartz, William D., Elena Milivinti, Fabricio Rodrigues, Finn Wilson, ga.ub...@gmail.com, Giacomo De Colle, glfo...@gmail.com, Gloria Sanso, hector...@gmail.com, Hunter Clark, Jaron Cheung, Jinjun Xiong, Jonathan Vajda, jonmc...@gmail.com, Joshua Billig, Lauren Mabe, Lindsay Cowell, mark.p...@cbp.dhs.gov, Melissa Van Norden, Michael Rabenberg, Naveed Shah, Olivia Hobai, Peihong Xie, Peter Elkin, Rachel Mavrovich, Rachel Stephens, Ram Samudrala, Regina Hurley, Richard Scheuermann, Robert Krieter, Ross Koppel, Samuel Eskew, Sean Kindya, Sebastian Duesing, Skyler Resendez, sydney...@gmail.com, Timothy Murphy, tmp...@gmail.com, Wenjin J. Zheng, Werner Ceusters, Yongqun He, Zackary Falls, Fabian Neuhaus, Janna Hastings, obo-d...@googlegroups.com, isaacs...@u.northwestern.edu, James Egan, L Bates-Rodriguez, daniel...@utoronto.ca, bfo-d...@googlegroups.com, semant...@googlegroups.com, ontolog-forum, Claudio Masolo, luca.b...@loa.istc.cnr.it, iuris.mo...@unipd.it, ROBERTA FERRARIO, Kathrin Koslicki, Richard Ohrbach, Sonia Sharma, Sam Border, Fabricio Henrique Rodrigues
I understand the strength of unitication.
However, the OBO foundry is Open Biological and Biomedical Ontology Foundry, and the CTSA is more inclined to be clinical. There is a small gap. Perhaps you could open a subspace for all CTSOC ontologies on the OBO Foundry server?
Thanks,
Asiyah
On Thu, Oct 9, 2025 at 3:43 PM STEFANO BORGO <stefan...@cnr.it> wrote:
Dear all,please remove my email address from this exchange.Thank you for your understanding.
Best
Stefano
On 9 Oct 2025, at 17:07, Bjoern Peters <bpe...@lji.org> wrote:
I am happy to hear that adherence to OBO principles is adopted as a goal! The most straightforward approach would be to ask for ontologies to be submitted to the OBO group, and to pass the dashboard / community review. I hope that is the plan, rather than adopting some parallel infrastructure?
- Bjoern
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Bjoern Peters
Professor
La Jolla Institute for Immunology
9420 Athena Circle
La Jolla, CA 92037, USA
Tel: 858/752-6914
Fax: 858/752-6987
http://www.liai.org/pages/faculty-peters
P Wagner
Oct 9, 2025, 10:03:07 PM (2 days ago) Oct 9
to ontolo...@googlegroups.com
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