Inactive Link - Oncotree to Oncotree Python Mapping Tool

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Hannah Calkins

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Nov 19, 2025, 10:11:11 AMNov 19
to OncoTree Users
Hi all,

I am getting a 404 not found error when I try to download the Oncotree to Oncotree python mapping tool at this link: https://oncotree.mskcc.org/downloads/oncotree_to_oncotree.py.

I am attempting to download it from this page: https://oncotree.mskcc.org/mapping

The error message I receive is:

Whitelabel Error Page

This application has no explicit mapping for /error, so you are seeing this as a fallback.

Wed Nov 19 15:08:48 GMT 2025
There was an unexpected error (type=Not Found, status=404).
No message available

I was hoping to use this tool to update a mapping file we have that utilizes a much older version of oncotree than the current stable release.  Is there another place I should access the tool?

Thanks!
Hannah

Rima AlHamad

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Nov 20, 2025, 5:16:39 PMNov 20
to OncoTree Users

Hi Hannah,

Thanks for reporting the error; we're currently working on fixing the oncotree_to_oncotree.py link on the OncoTree mapping website (https://oncotree.mskcc.org/mapping) and should have that updated soon.

In the meantime, you can access and download the script directly from the OncoTree GitHub page here: https://github.com/cBioPortal/oncotree/tree/master/scripts

Please let us know if you run into any issues.

Best,
Rima

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