Support for bacterial strains

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marios mat

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Jul 24, 2023, 3:00:28 AM7/24/23
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Dear authors of the omicsplayground, I would like to use the tool in my research but I work with omic data derived from bacterial strains or communities. So, I would like to ask you if it is possible to add support for the following seven bacterial strains: Streptococcus thermophilus JIM8232, Lactococcus lactis subsp. lactis IL1403, Lactiplantibacillus plantarum JDM1, Lacticaseibacillus paracasei 8700:2, Pediococcus pentosaceus ATCC 25745, Lactobacillus delbrueckii subsp. bulgaricus 2038, and Latilactobacillus sakei subsp. sakei 23K. The list of the gene IDs of the expression matrix is from the ENSEMBL for Bacteria. Thank you.

Mauro Masiero

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Aug 4, 2023, 7:30:19 AM8/4/23
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Dear User,

We do not have yet support for bacterial species, but that development is in the roadmap. In case you have more questions or want to know more about timelines, please contact he...@bigomics.ch.

Kind regards,
Mauro
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