Oligotyping on Fungal

[Ilario Ferrocino]

Hi there,

i'm doing oligotyping on Fungal ITs datasets.

I would like to know how the different gene's copy number can affect the final results. Because in some species there are several copy of the ITS.

How this gap can affect the final results? I meant the oligotyping that i retrived coming from the differences in the copy sequence?

 Is there some way to normalize the copy number 

Best

Ilario