Using OTU ID instead of taxonomic name
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nl...@students.uwf.edu
Nov 2, 2016, 4:34:23 PM11/2/16
to Oligotyping and MED
Hello all,
I am wondering if it is possible to run the q2oligo.py script and instead of using a taxonomic name such as "Synechococcus" would it be possible to use an OTU ID such as AY664005.1?
// Nine
I am wondering if it is possible to run the q2oligo.py script and instead of using a taxonomic name such as "Synechococcus" would it be possible to use an OTU ID such as AY664005.1?
// Nine
Mauricio Pacheco
Apr 27, 2017, 9:45:09 AM4/27/17
to Oligotyping and MED
Hello,
You could try editing the taxonomy file (_tax_assignments.txt), where the word Synechococcus is changed by AY664005.1
Mauricio
You could try editing the taxonomy file (_tax_assignments.txt), where the word Synechococcus is changed by AY664005.1
Mauricio
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