In recent years, I've taken greater interest in improved intonation. The first challenge in doing so is to be able to accurately measure how closely each note is to its desired pitch, ideally the deviation in cents.
In pursuit of this, I've used a few electronic tuners, the best of which have been Peterson's phone application iStroboSoft (on an iPhone) and their Strobo Flip, both of which are digital strobe tuners. The problem with each of these is in reading their displays. The input pitch/note is in tune when the rotating (strobe) display becomes stationary - stops rotating. In practice, this is much more difficult than it sounds - no pun intended.
Pitches often start sharp and flatten as they decay. Other pitches don't ever yield a stationary display, regardless of the tuning of the note. For many pitches, the strobe becomes something of a random number generator where one simply randomly choses when one thinks the display provides an in-tune pitch. I have not yet contacted Peterson for their input, but might do so. It might simply be I'm using the wrong tools for the job.
My question is, for those doing intonation work beyond simply comparing the 12th fret note to the open string or 12th fret harmonic, what are you using for your detailed measurement of pitches when setting intonation of the entire instrument?
Thanks,
Charles