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obo-anatomy
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Richard Dann LeDuc
,
Chris Mungall
2
6/8/21
[Obo-anatomy] Ovarian anatomy nomenclature update
Hi Richard, Yes, please use the tracker I am not sure how many people read this list any more, the
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[Obo-anatomy] Ovarian anatomy nomenclature update
Hi Richard, Yes, please use the tracker I am not sure how many people read this list any more, the
6/8/21
Chris Mungall
9/30/20
[Obo-anatomy] Taxon constraint tickets in CL and Uberon
I made a GitHub project to organize various tickets in CL and Uberon trackers pertaining to taxon
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[Obo-anatomy] Taxon constraint tickets in CL and Uberon
I made a GitHub project to organize various tickets in CL and Uberon trackers pertaining to taxon
9/30/20
Chris Mungall
2/14/20
[Obo-anatomy] Happy Valentines day from Uberon
We had a lot of fun making the heart hierarchy in Uberon a few years ago. I made a thread about it,
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[Obo-anatomy] Happy Valentines day from Uberon
We had a lot of fun making the heart hierarchy in Uberon a few years ago. I made a thread about it,
2/14/20
Chris Mungall
9/10/18
[Obo-anatomy] is the hepatobiliary system part of the digestive system?
Weight in here: https://github.com/obophenotype/uberon/issues/1456 Thanks!
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[Obo-anatomy] is the hepatobiliary system part of the digestive system?
Weight in here: https://github.com/obophenotype/uberon/issues/1456 Thanks!
9/10/18
Guille Reales
, …
Frederic Bastian
6
5/14/18
[Obo-anatomy] UBERON. A way to retrieve relationships?
Thank you for your comments Frederic, I'll definitely contact you in the next future for more
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[Obo-anatomy] UBERON. A way to retrieve relationships?
Thank you for your comments Frederic, I'll definitely contact you in the next future for more
5/14/18
Chris Mungall
5/4/18
[Obo-anatomy] Fwd: [OBOFoundry/OBOFoundry.github.io] Request for COLL prefix and PURL (#610)
Hi, anyone have any time to provide guidance to Luis? Specifically members of obo-arthropod community
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[Obo-anatomy] Fwd: [OBOFoundry/OBOFoundry.github.io] Request for COLL prefix and PURL (#610)
Hi, anyone have any time to provide guidance to Luis? Specifically members of obo-arthropod community
5/4/18
ad...@bioontology.org
,
Chris Mungall
4
11/21/17
[Obo-anatomy] [BioPortal] Load from URL failure for Spatial Ontology
Hi John, We're getting these messages fro BSPO and CARO. It looks like you have old sourceforge
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[Obo-anatomy] [BioPortal] Load from URL failure for Spatial Ontology
Hi John, We're getting these messages fro BSPO and CARO. It looks like you have old sourceforge
11/21/17
ad...@bioontology.org
2
11/21/17
[Obo-anatomy] [BioPortal] Load from URL failure for Common Anatomy Reference Ontology
BioPortal failed to load Common Anatomy Reference Ontology (CARO) from URL: http://obo.cvs.
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[Obo-anatomy] [BioPortal] Load from URL failure for Common Anatomy Reference Ontology
BioPortal failed to load Common Anatomy Reference Ontology (CARO) from URL: http://obo.cvs.
11/21/17
ad...@bioontology.org
9/27/17
[Obo-anatomy] [BioPortal] Load from URL failure for Spatial Ontology
BioPortal failed to load Spatial Ontology (BSPO) from URL: http://obo.cvs.sourceforge.net/*checkout*/
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[Obo-anatomy] [BioPortal] Load from URL failure for Spatial Ontology
BioPortal failed to load Spatial Ontology (BSPO) from URL: http://obo.cvs.sourceforge.net/*checkout*/
9/27/17
ad...@bioontology.org
9/27/17
[Obo-anatomy] [BioPortal] Load from URL failure for Common Anatomy Reference Ontology
BioPortal failed to load Common Anatomy Reference Ontology (CARO) from URL: http://obo.cvs.
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[Obo-anatomy] [BioPortal] Load from URL failure for Common Anatomy Reference Ontology
BioPortal failed to load Common Anatomy Reference Ontology (CARO) from URL: http://obo.cvs.
9/27/17
SourceForge.net
6/30/17
Reconfirm subscription to obo-anatomy mailing list
Hi, This is a reminder to reconfirm your subscriptions to these mailing lists: obo-anatomy If you are
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Reconfirm subscription to obo-anatomy mailing list
Hi, This is a reminder to reconfirm your subscriptions to these mailing lists: obo-anatomy If you are
6/30/17
SourceForge.net
6/9/17
Important Account Information - Reconfirm Mailing List Subscriptions
Hi, Thanks for being a SourceForge user. Our records indicate that you are subscribed to the
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Important Account Information - Reconfirm Mailing List Subscriptions
Hi, Thanks for being a SourceForge user. Our records indicate that you are subscribed to the
6/9/17
Chris Mungall
, …
Robb, Sofia
10
2/3/17
[Obo-anatomy] Best practice for citing manuscripts with DOIs etc
I like the way GO formats theirs. I will go with PLANA_REF:000000 — Sofia MC Robb, Ph.D Genomic
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[Obo-anatomy] Best practice for citing manuscripts with DOIs etc
I like the way GO formats theirs. I will go with PLANA_REF:000000 — Sofia MC Robb, Ph.D Genomic
2/3/17
Sofia Robb
2/2/17
[Obo-anatomy] dbxref of a citation
Hello, I am creating an obo file with definition lines that have references that cannot be found in
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[Obo-anatomy] dbxref of a citation
Hello, I am creating an obo file with definition lines that have references that cannot be found in
2/2/17
Chris Mungall
1/30/16
[Obo-anatomy] Uberon 2016-01-26 release
There is a new release of Uberon available, release notes are here: http://uberon.github.io/release/
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[Obo-anatomy] Uberon 2016-01-26 release
There is a new release of Uberon available, release notes are here: http://uberon.github.io/release/
1/30/16
Sofia Robb
, …
Hilmar Lapp
10
8/27/15
[Obo-anatomy] where to begin?
On Aug 19, 2015, at 6:15 PM, Chris Mungall <CJMu...@lbl.gov> wrote: Yes, as it happens, there
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[Obo-anatomy] where to begin?
On Aug 19, 2015, at 6:15 PM, Chris Mungall <CJMu...@lbl.gov> wrote: Yes, as it happens, there
8/27/15
ad...@bioontology.org
8/19/15
[Obo-anatomy] [BioPortal] Load from URL failure for Spatial Ontology
BioPortal failed to load Spatial Ontology (BSPO) from URL: http://obo.cvs.sourceforge.net/*checkout*/
unread,
[Obo-anatomy] [BioPortal] Load from URL failure for Spatial Ontology
BioPortal failed to load Spatial Ontology (BSPO) from URL: http://obo.cvs.sourceforge.net/*checkout*/
8/19/15
ad...@bioontology.org
8/19/15
[Obo-anatomy] [BioPortal] Load from URL failure for Common Anatomy Reference Ontology
BioPortal failed to load Common Anatomy Reference Ontology (CARO) from URL: http://obo.cvs.
unread,
[Obo-anatomy] [BioPortal] Load from URL failure for Common Anatomy Reference Ontology
BioPortal failed to load Common Anatomy Reference Ontology (CARO) from URL: http://obo.cvs.
8/19/15
in...@flipmailer.com
4/18/15
[Obo-anatomy] You have a new notification from ravensar@u.washington.edu. View??
Click here to discover rave...@u.washington.edu's favorite content! New Notification You have a
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[Obo-anatomy] You have a new notification from ravensar@u.washington.edu. View??
Click here to discover rave...@u.washington.edu's favorite content! New Notification You have a
4/18/15
in...@infoaxe.net
4/14/15
[Obo-anatomy] ravensar@u.washington.edu has indicated you're a friend. Accept?
Click here to discover rave...@u.washington.edu's favorite content! rave...@u.washington.edu
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[Obo-anatomy] ravensar@u.washington.edu has indicated you're a friend. Accept?
Click here to discover rave...@u.washington.edu's favorite content! rave...@u.washington.edu
4/14/15
Ceri Van Slyke
3/29/15
[Obo-anatomy] New version zebrafish anatomy ontology available
Hi, We have updated the zebrafish anatomical ontology here at ZFIN. The file can be reached via http:
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[Obo-anatomy] New version zebrafish anatomy ontology available
Hi, We have updated the zebrafish anatomical ontology here at ZFIN. The file can be reached via http:
3/29/15
Chris Mungall
3/15/15
[Obo-anatomy] Namespace request for 2 anatomy ontologies: CTENO and MOLO
In preparation for the next uberon release, which will incorporate sponge, ctenophore and cephalopod
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[Obo-anatomy] Namespace request for 2 anatomy ontologies: CTENO and MOLO
In preparation for the next uberon release, which will incorporate sponge, ctenophore and cephalopod
3/15/15
Catia Pesquita
9/4/14
[Obo-anatomy] [bioportal-announce] CFP: Visualizations and User Interfaces for Knowledge Engineering and Linked Data Analytics
CALL FOR PAPERS Visualizations and User Interfaces for Knowledge Engineering and Linked Data
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[Obo-anatomy] [bioportal-announce] CFP: Visualizations and User Interfaces for Knowledge Engineering and Linked Data Analytics
CALL FOR PAPERS Visualizations and User Interfaces for Knowledge Engineering and Linked Data
9/4/14
Chris Mungall
6/20/14
[Obo-anatomy] My Corporis Fabrica: Biomechanical functions of anatomical structures
MCF is an ontology that extends the FMA with a biomechanical function ontology, with structure-
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[Obo-anatomy] My Corporis Fabrica: Biomechanical functions of anatomical structures
MCF is an ontology that extends the FMA with a biomechanical function ontology, with structure-
6/20/14
Chris Mungall
, …
Jonathan Bard
3
4/25/14
[Obo-anatomy] digits: where do they start
Chris You have picked up on the classic problem: where should boundaries be set? On the basis of
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[Obo-anatomy] digits: where do they start
Chris You have picked up on the classic problem: where should boundaries be set? On the basis of
4/25/14
Ray Fergerson
,
Chris Mungall
3
4/4/14
[Obo-anatomy] Uberon parsing failing
Great. Thanks. Want to make sure that I have the right download address. Currently we download from:
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[Obo-anatomy] Uberon parsing failing
Great. Thanks. Want to make sure that I have the right download address. Currently we download from:
4/4/14
Melissa Haendel
4/3/14
[Obo-anatomy] CfP - Phenotype Day @ BioLink/BioOntologies SIG, ISMB, 12 July 2014
*****************************************************************************************************
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[Obo-anatomy] CfP - Phenotype Day @ BioLink/BioOntologies SIG, ISMB, 12 July 2014
*****************************************************************************************************
4/3/14
Chris Mungall
4/1/14
[Obo-anatomy] Mapping the Embryo for Developmental Biologists & Stem Cell Researchers; LifeMap Discovery – a Roadmap of Mammalian Cell Ontology
Just spotted this today http://thenode.biologists.com/mapping-the-embryo-for-developmental-biologists
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[Obo-anatomy] Mapping the Embryo for Developmental Biologists & Stem Cell Researchers; LifeMap Discovery – a Roadmap of Mammalian Cell Ontology
Just spotted this today http://thenode.biologists.com/mapping-the-embryo-for-developmental-biologists
4/1/14
Chris Mungall
, …
Suzanna Lewis
3
3/11/14
[Obo-anatomy] EMAPA browser at MGI
This is one step closer to having the temporal progression of the different anatomical structures
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[Obo-anatomy] EMAPA browser at MGI
This is one step closer to having the temporal progression of the different anatomical structures
3/11/14
Chris Mungall
,
Suzanna Lewis
2
3/1/14
[Obo-anatomy] ZFA paper in JBMS
well done! On Feb 28, 2014, at 5:09 PM, Chris Mungall <cjmu...@lbl.gov> wrote: http://www.
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[Obo-anatomy] ZFA paper in JBMS
well done! On Feb 28, 2014, at 5:09 PM, Chris Mungall <cjmu...@lbl.gov> wrote: http://www.
3/1/14