Hi Yannick and all,
I am updating the data harmonisation of a study and I am testing in Opal (v.3.0.4) the reports in Rmarkdown. I have added a simple Report template in Rmd and it successfully generates an html file. However, I have two questions at this moment:
1) If the Rmd file calls other R files that include other functions (e.g. > source("otherFunct.R")), where do I place this file? I have tried unsuccessfully calling it on github (e.g., > devtools::source_url("
https://raw.githubusercontent.com/.../otherFunct.R"); Error in curl::curl_fetch_memory(url, handle = handle) : OpenSSL SSL_connect: SSL_ERROR_SYSCALL in connection to
raw.githubusercontent.com:443 )
2) The report generated with html, how could it be published on the main Mica website? At the moment, the way I can think of is copying the html in "Files" within the study. Is there another way?
Thanks so much in advance.
Best,
Albert
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Albert Sanchez Niubo, PhD
Researcher / Statistician
Parc Sanitari Sant Joan de Déu
Sant Boi de Llobregat (Barcelona)
albert.sanchez (at) pssjd.org
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