4D conversion from nmrPipe

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Andrea Piserchio

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Aug 18, 2017, 6:47:18 PM8/18/17
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Dear all,
I collected a 4D (C13)HSQC-NOESY-(N15)HSQC with nus.
Once reconstructed, the fid consists of 512x40x70x34 complex points (HN N 1H 13)
I processed it with nmrPipe/SMILE and tried to convert it in nmrView format.
It seems I can successfully convert it only if keep the size of the pipe data below 1.2 G.
This can be done by limiting the digital resolution as well as the H_SW. 
I'd like to increase the resolutions  and Sws, but this means generating data of 28 G, or more.
Then I get:

xyz2pipe -in ft/test%04d.ft4 -x | pipe2xyz -out 4D.nv -x -nv
902 256 256 128 1 32768 4D.nv
Floating exception (core dumped)


Is there a way around it?

Thank you in advance for your answer


brucej

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Aug 30, 2017, 10:19:10 AM8/30/17
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I'm pretty sure I've got a fix for this.  A little more testing and I'll send you a copy of fixed pipe2xyz and the fix to Frank Delaglio so he can incorporate it in the standard distribution.

Bruce
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