Extract intensities from slice

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Marco Sette

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May 6, 2025, 8:22:15 AMMay 6
to NMR POKY/SPARKY USER GROUP
Dear all,
Is it possible to obtain a slice and extract the intensities?

Best,
Marco Sette

Lee, Woonghee

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May 6, 2025, 8:46:49 AMMay 6
to Marco Sette, NMR POKY/SPARKY USER GROUP
Marco, do you use pseudo 3D data? You can split using easy ucsfdata gui. 
Image.png




--
Woonghee Lee, Ph.D.

Assistant Professor of Chemistry & Data Science and Chemistry Certificate Program Director
University of Colorado Denver


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Sent: Tuesday, May 6, 2025 6:22:14 AM
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Subject: [NMR POKY/SPARKY] Extract intensities from slice
 
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NMR POKY/SPARKY USER GROUP

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May 6, 2025, 10:28:54 AMMay 6
to NMR POKY/SPARKY USER GROUP

Actual question was about extracting 1D from 2D.



Answer is,

 

In Poky Notepad “Pn”, File > Poky Scripts > Find Additional …

 

Choose “plot_slice1D_from_2D_script.py” and run by ctrl+b or cmd+b. One 2D peak must be selected to run the script. 

Marco Sette

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May 7, 2025, 4:45:18 AMMay 7
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Hi,

I got the values I need, bottom left of the attached figure, but the plots seem very different from the real slices. So, if the values refer to the plots I think something is wrong.

Best,

Marco

Marco Sette

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May 7, 2025, 9:51:35 AMMay 7
to NMR POKY/SPARKY USER GROUP
Hi,

I got the values I need, bottom left of the attached figure, but the plots seem very different from the real slices. So, if the values refer to the plots I think something is wrong.

Best,

Marco


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slice.jpg

Lee, Woonghee

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May 7, 2025, 9:59:55 AMMay 7
to Marco Sette, NMR POKY/SPARKY USER GROUP
Hi Marco,

Values are 1e9 scaled. Still wrong?


--
Woonghee Lee, Ph.D.

Assistant Professor of Chemistry & Data Science and Chemistry Certificate Program Director
University of Colorado Denver


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Sent: Wednesday, May 7, 2025 7:51:03 AM

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