Re: Synchronizing Strip plots with HSQC spectra
Abhishek Bastiray
I was wondering if there is a way to synchronize strip plots from different spectra (e.g., HNCACB, CCONH) with the corresponding peaks in an HSQC spectrum. Ideally, I would like to be able to click on a peak in the HSQC and have the strip plots automatically align with that particular peak. I haven’t been able to find a feature or method to achieve this.
Additionally, is there a feature that allows navigation between different slices (along the Z-axis) of a peak within the same strip plot? Currently, I can zoom in and out, but I am unable to view different slices. Any guidance on this would be greatly appreciated.
Thank you so much.
Regards,
Abhishek
Lee, Woonghee
Dear Abhishek,
It works as you wish now. Are you using the strip plot “st” ? After configuring 3D spectra (e.g. HNCACB and CCONH) to use in the strip plot, you can select an HSQC peak and type “sk”.
For Z-axis navigation, you can type , or .
Check “Cheat Sheet”.
Best,
Woonghee Lee, I.E.I.P., M.S., Ph.D.
Assistant Professor & Data Science and Chemistry Certificate Program Director
Department of Chemistry
University of Colorado Denver
1151 Arapahoe St. (Science Bldg.) Rm 4128A (office), Rm 4128 (dry lab), Rm 4133 (wet lab)
Denver, CO 80217-3364, USA
Office: +1-303-315-7672
https://poky.clas.ucdenver.edu
https://poky.clas.ucdenver.edu/wlee-group
https://clas.ucdenver.edu/chemistry/woonghee-lee
https://clas.ucdenver.edu/chemistry/data-science-and-chemistry-certificate
Shipping/Mailing Address:
Woonghee Lee
1201 5th St. UCD CHEM-194
P.O. Box 173364 (USPS)
Denver, CO 80204, USA
From:
'Abhishek Bastiray' via NMR POKY/SPARKY USER GROUP <nmr-s...@googlegroups.com>
Date: Tuesday, October 15, 2024 at 5:09 PM
To: NMR POKY/SPARKY USER GROUP <nmr-s...@googlegroups.com>
Subject: [NMR POKY/SPARKY] Re: Synchronizing Strip plots with HSQC spectra
|
[External Email - Use Caution] |
--
You received this message because you are subscribed to the Google Groups "NMR POKY/SPARKY USER GROUP" group.
To unsubscribe from this group and stop receiving emails from it, send an email to
nmr-sparky+...@googlegroups.com.
To view this discussion on the web visit
https://groups.google.com/d/msgid/nmr-sparky/1f2fad14-59a4-40e0-9ea2-6bc220a05630n%40googlegroups.com.
Lee, Woonghee
Oh, “sp” not “st”.
I do not understand your question because “sk” does what you want essentially. Do you keep all possible strips loaded always? That’s not recommended way. Only load what you need by “sk”. You don’t need to do “yt” since “sk” automatically loads related strips from 3D spectra.
Best,
Sent: Tuesday, October 15, 2024 5:13:44 PM
To: Abhishek Bastiray <bast...@tamu.edu>; NMR POKY/SPARKY USER GROUP <nmr-s...@googlegroups.com>
Subject: Re: [NMR POKY/SPARKY] Re: Synchronizing Strip plots with HSQC spectra