Cannot submit I-PINE auto assignment

18 views
Skip to first unread message

Mason Wang

unread,
Apr 24, 2025, 2:27:43 PMApr 24
to NMR POKY/SPARKY USER GROUP
Hi,
I am trying to submit the auto assignment either through I-PINE web or PINE-SPARKY. But it always responded with an error. I think my imported files format are correct. I wonder if anyone can give a hand.
Thanks a lot.
"
An unknown error has occured during the process of your job in I-PINE. Please make sure that your sequence file and peak lists are in the correct format because most of the time they are the source of error, and then reupload your job. Please check if you included correct data heights for the peaks, too. POKY has a function to export correct I-PINE input formats (two-letter-code "ep" and "sq"). Note that there are many cases caused by input of non-text sequence file by users.
"
Mason

Lee, Woonghee

unread,
Apr 24, 2025, 2:35:50 PMApr 24
to Mason Wang, NMR POKY/SPARKY USER GROUP

Mason,

 

Once easiest way is to exclude experiments one by one and check what causes the problem. There can be a few different reasons like unaccepted peaks in the experiment, wrong experiment set up (e.g. HNCACB for HN(CA)CB). Also, if you can provide the job id “IPINE_XXXXXX_XXX….” to me privately, I will be able to tell you what happened.

 

Best,

Woonghee Lee, I.E.I.P., M.S., Ph.D.

 

Assistant Professor & Data Science and Chemistry Certificate Program Director

Department of Chemistry

University of Colorado Denver

1151 Arapahoe St. (Science Bldg.) Rm 4128A (office), Rm 4128 (dry lab), Rm 4133 (wet lab)

Denver, CO 80217-3364, USA

Office: +1-303-315-7672

woongh...@ucdenver.edu

 

https://poky.clas.ucdenver.edu

https://poky.clas.ucdenver.edu/wlee-group

https://clas.ucdenver.edu/chemistry/woonghee-lee

https://clas.ucdenver.edu/chemistry/data-science-and-chemistry-certificate

 

Shipping/Mailing Address:

Woonghee Lee

1201 5th St. UCD CHEM-194

P.O. Box 173364 (USPS)

Denver, CO 80204, USA

 

A white circle with blue text and a black background

Description automatically generated

 

From: nmr-s...@googlegroups.com <nmr-s...@googlegroups.com> on behalf of Mason Wang <wangqia...@gmail.com>
Date: Thursday, April 24, 2025 at 12:27 PM
To: NMR POKY/SPARKY USER GROUP <nmr-s...@googlegroups.com>
Subject: [NMR POKY/SPARKY] Cannot submit I-PINE auto assignment

You don't often get email from wangqia...@gmail.com. Learn why this is important

 

[External Email - Use Caution]

--
You received this message because you are subscribed to the Google Groups "NMR POKY/SPARKY USER GROUP" group.
To unsubscribe from this group and stop receiving emails from it, send an email to nmr-sparky+...@googlegroups.com.
To view this discussion visit https://groups.google.com/d/msgid/nmr-sparky/b850fb7b-0e37-40c5-a689-d9c8f472221bn%40googlegroups.com.

Reply all
Reply to author
Forward
0 new messages