How to extract peaks from a BMRB and run into Poky [POKY QUESTION]

[Gabriel Alcántara]

Hello Everybody. I hope you can help me,

I am currently, processing a 1H-15N HSQC spectra for a protein and I want to assign the peaks. I found in the Biological Magnetic Bank Data Base the assignments for this protein. Is there a way to copy these assignments and paste it into Poky? I found the files with .xls and .rdf format. Is there a way to convert these files in something compatible with poky? 

Thank you in advance

[Lee, Woonghee]

Please follow this video.

https://youtu.be/5215ofvgpbo?feature=shared

 

 

 

Woonghee Lee, I.E.I.P., M.S., Ph.D.

 

Assistant Professor

Department of Chemistry

University of Colorado Denver

1151 Arapahoe St. (Science Bldg.) Rm 4128A

Denver, CO 80217-3364, USA

Office: +1-303-315-7672

woongh...@ucdenver.edu

 

https://poky.clas.ucdenver.edu

https://poky.clas.ucdenver.edu/wlee-group

https://clas.ucdenver.edu/chemistry/woonghee-lee

 

Shipping/Mailing Address:

Woonghee Lee

1201 5^th St. UCD CHEM-194

P.O. Box 173364 (USPS)

Denver, CO 80204, USA

 

 

From: nmr-s...@googlegroups.com <nmr-s...@googlegroups.com> on behalf of Gabriel Alcántara <gaba...@gmail.com>
Date: Monday, April 1, 2024 at 11:44 AM
To: NMR POKY/SPARKY USER GROUP <nmr-s...@googlegroups.com>
Subject: [NMR POKY/SPARKY] How to extract peaks from a BMRB and run into Poky [POKY QUESTION]

[External Email - Use Caution]

Hello Everybody. I hope you can help me,

 

I am currently, processing a 1H-15N HSQC spectra for a protein and I want to assign the peaks. I found in the Biological Magnetic Bank Data Base the assignments for this protein. Is there a way to copy these assignments and paste it into Poky? I found the files with .xls and .rdf format. Is there a way to convert these files in something compatible with poky? 

 

Thank you in advance

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