Exporting CCPN peaklist to use in SPARKY/POKY

[Aerial Owens]

Hi all,

I have seen that there were two previous chats about my current problem, though I have not been able to resolve it, unfortunately. I am currently  interested in utilizing SPARKY/POKY for the CHESPA/CHESCA program, though over the last few years I have worked on my NMR data mostly with ccpn. So far, I have converted my HSQC spectra from .ft2 to .ucsf format. I am now wanting to add peak assignment labels in SPARKY according to what I have already assigned in ccpn. I do not want to import the BMRB assignments into SPARKY and have to match the peaks up all over again (for 20+ spectra). I think I should use "rp", but what kind of file can I use from ccpn for this? I have tried NEF format and that did not work. I attempted to use format converter in v2.5 of cppn but it does even open the projects (I am guessing because they are saved in the newer cppn v3?). I get the error "no map found for the XML attribute: _lastId."

Thank you for any help you can provide!!

-Aerial M. Owens

Arizona State University

[Lee, Woonghee]

See if this video is addressing your need.

https://youtu.be/5215ofvgpbo?feature=shared

 

Then, copy (ctrl+a/c) and paste (ctrl+v) followed by minimal adjustments.

 

Woonghee Lee, I.E.I.P., M.S., Ph.D.

 

Assistant Professor

Department of Chemistry

University of Colorado Denver

1151 Arapahoe St. (Science Bldg.) Rm 4128A

Denver, CO 80217-3364, USA

Office: +1-303-315-7672

woongh...@ucdenver.edu

 

https://poky.clas.ucdenver.edu

https://poky.clas.ucdenver.edu/wlee-group

https://clas.ucdenver.edu/chemistry/woonghee-lee

 

Shipping/Mailing Address:

Woonghee Lee

1201 5^th St. UCD CHEM-194

P.O. Box 173364 (USPS)

Denver, CO 80204, USA

 

 

From: nmr-s...@googlegroups.com <nmr-s...@googlegroups.com> on behalf of Aerial Owens <ampr...@asu.edu>
Date: Thursday, May 9, 2024 at 12:21 PM
To: NMR POKY/SPARKY USER GROUP <nmr-s...@googlegroups.com>
Subject: [NMR POKY/SPARKY] Exporting CCPN peaklist to use in SPARKY/POKY

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