jeol spectra

Michal Jewginski

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Nov 18, 2021, 3:03:15 AM11/18/21

to NMR POKY/SPARKY USER GROUP

Hi

I'm trying to analyze 2D spectra recorded on JEOL spectrometer, but I've got a problem with the conversion the spectra on the sparky file format. I tried to save it in the bruker file format in Delta software and than converted it into sparky file format, but it filed.

I would be appreciate for any suggestion and help.

best regards

Michał

Lee, Woonghee

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Nov 18, 2021, 9:01:08 AM11/18/21

to Michal Jewginski, NMR POKY/SPARKY USER GROUP

Dear Michal,

I suggest using nmrpipe and pipe2ucsf.

Best,

Woonghee

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Subject: [NMR POKY/SPARKY] jeol spectra

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Angelo Gallo

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Dec 9, 2021, 11:56:13 AM12/9/21

to NMR POKY/SPARKY USER GROUP

Hi everyone,

I have the same problem. For some reason I cannot transform from JEOL Delta software to nmrPipe or Sparky to analyze them.

Any suggestions for POKY?

Best

Angelo

Lee, Woonghee

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Dec 9, 2021, 11:59:24 AM12/9/21

to Angelo Gallo, NMR POKY/SPARKY USER GROUP

Dear Angelo,

You can use “delta” of the NMRPipe package to convert to NMRPipe-format data. It generates a script running delta2pipe program. You can run that generated script to make NMRPipe-format data. Then, you can use NMRPipe/NMRDraw to process the data. After that, you can use the pipe2ucsf script or just drag’n drop into POKY.

Best,

Woonghee

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From: <nmr-s...@googlegroups.com> on behalf of Angelo Gallo <angelo....@gmail.com>

Date: Thursday, December 9, 2021 at 9:56 AM
To: NMR POKY/SPARKY USER GROUP <nmr-s...@googlegroups.com>

Subject: Re: [NMR POKY/SPARKY] jeol spectra

[External Email - Use Caution]Hi everyone,

To view this discussion on the web visit https://groups.google.com/d/msgid/nmr-sparky/f58e15f6-9139-45cf-be80-1e08f0b607b6n%40googlegroups.com.

Angelo Gallo

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Jan 12, 2022, 9:23:14 AM1/12/22

to NMR POKY/SPARKY USER GROUP

Thanks a lot, is this command also working in POKY?

Thanks again

Angelo

Lee, Woonghee

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Jan 12, 2022, 10:26:37 AM1/12/22

to Angelo Gallo, NMR POKY/SPARKY USER GROUP

"delta" is in NMRPIPE. It reads the Jeol spectrum and makes a "delta2pipe" script.

https://spin.niddk.nih.gov/NMRPipe/ref/prog/delta2pipe.html

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From: nmr-s...@googlegroups.com <nmr-s...@googlegroups.com> on behalf of Angelo Gallo <angelo....@gmail.com>
Sent: Wednesday, January 12, 2022 7:23:14 AM

To: NMR POKY/SPARKY USER GROUP <nmr-s...@googlegroups.com>
Subject: Re: [NMR POKY/SPARKY] jeol spectra

[External Email - Use Caution]Thanks a lot, is this command also working in POKY?

To view this discussion on the web visit https://groups.google.com/d/msgid/nmr-sparky/a1cfbc42-dd11-4afb-b878-44f3c5a3701fn%40googlegroups.com.

Angelo Gallo

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Jan 12, 2022, 10:37:45 AM1/12/22

to Lee, Woonghee, NMR POKY/SPARKY USER GROUP

Hi

I cannot install NMRPIPE again since I have a MAC m1 processor. How do I solve this problem?

This command is not available in POKY that is the only thing that works at the moment.

I try with virtual machine but i did not succeed

Angelo

Lee, Woonghee

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Jan 12, 2022, 10:39:17 AM1/12/22

to Angelo Gallo, NMR POKY/SPARKY USER GROUP

You can try nmrbox.

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Sent: Wednesday, January 12, 2022 8:37:32 AM
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