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T. Dalton Combs
10/7/14
FSL FLAMEO tstats
One of the outputs of FLAMEO is 'tstats' what do the values in this image mean? The appear to
unread,
FLAMEO
fsl
nipype
FSL FLAMEO tstats
One of the outputs of FLAMEO is 'tstats' what do the values in this image mean? The appear to
10/7/14
CL
,
Satrajit Ghosh
5
10/16/14
FSL & Nipype IOError
Thank you for the assistance, I determined yesterday that iPython and Spyder were using a different
unread,
environmental
fsl
issue
neurodebian
nipype
FSL & Nipype IOError
Thank you for the assistance, I determined yesterday that iPython and Spyder were using a different
10/16/14
parnesh...@gmail.com
,
Satrajit Ghosh
3
9/23/14
nipype and fsl_sub
Thanks. I found out that this particular cluster had a modified fsl_sub for PBS/Torque that did not
unread,
cluster
fsl
fsl_sub
nipype
nipype and fsl_sub
Thanks. I found out that this particular cluster had a modified fsl_sub for PBS/Torque that did not
9/23/14
Yasin Yazıcı
,
Satrajit Ghosh
5
9/8/14
fslchfiletype
replace this line: if not isdefined(outputs['out_file']): outputs['out_file'] = self.
unread,
filetype
fsl
fslchfiletype
replace this line: if not isdefined(outputs['out_file']): outputs['out_file'] = self.
9/8/14
Yasin Yazıcı
,
Satrajit Ghosh
2
7/9/14
out_file error
hi yasin, # fsl ChangeDataType fsl_cdt = pe.Node(interface = fsl.ChangeDataType(), name = '
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error
fsl
nipype
rename
out_file error
hi yasin, # fsl ChangeDataType fsl_cdt = pe.Node(interface = fsl.ChangeDataType(), name = '
7/9/14
Julia Huntenburg
7/3/14
Combining ANTs/itk and FSL style deformation fields
Hi, does anyone know of a way to apply deformation fields derived from FSL (warpfield from
unread,
ants
fsl
itk
registration
Combining ANTs/itk and FSL style deformation fields
Hi, does anyone know of a way to apply deformation fields derived from FSL (warpfield from
7/3/14
thomas.nickson
, …
Arman Eshaghi
3
6/16/14
Motion regressors
or to wrap it as a Nipype interface on yourself and perhaps contribute to the whole project: http://
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fsl
motioncorrection
nipype
Motion regressors
or to wrap it as a Nipype interface on yourself and perhaps contribute to the whole project: http://
6/16/14
Daniel Clark
,
Chris Filo Gorgolewski
8
3/27/14
NiPype's fsl.FIRST workflow outputs are being deleted
Hey sorry, I didn't get a chance to test this out until today. Yep! That fixed it. Thanks Chris.
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datasink
fsl
nipype
NiPype's fsl.FIRST workflow outputs are being deleted
Hey sorry, I didn't get a chance to test this out until today. Yep! That fixed it. Thanks Chris.
3/27/14
Augustine Koh
2
3/17/14
FSL FLIRT registration tool does not work as nipype interface/node but works as command line script
Today I also tried running the exact same registration using fsl.FLIRT as just an interface only: In
unread,
FSL_FLIRT
fsl
nipype
FSL FLIRT registration tool does not work as nipype interface/node but works as command line script
Today I also tried running the exact same registration using fsl.FLIRT as just an interface only: In
3/17/14
Augustine Koh
,
Michael Waskom
3
3/16/14
Problem with running some Nipype-FSL interface
Dear Michael, Thanks for your elucidation! the interface worked when I ran it on my own file! Cheers
unread,
fsl
nipype
Problem with running some Nipype-FSL interface
Dear Michael, Thanks for your elucidation! the interface worked when I ran it on my own file! Cheers
3/16/14
Kai Schlamp
,
Chris Filo Gorgolewski
3
2/11/14
Probtrackx2 support
https://github.com/nipy/nipype/issues/792 Am Freitag, 7. Februar 2014 18:15:19 UTC+1 schrieb Kai
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fsl
nipype
probtrackx
Probtrackx2 support
https://github.com/nipy/nipype/issues/792 Am Freitag, 7. Februar 2014 18:15:19 UTC+1 schrieb Kai
2/11/14
Eric
, …
Chris Filo Gorgolewski
6
2/3/14
Nipype Pipeline Pause or Break
We should write this down on a website or create a special interface with the busy wait machinery. A
unread,
fsl
nipype
workflow
Nipype Pipeline Pause or Break
We should write this down on a website or create a special interface with the busy wait machinery. A
2/3/14
Eric
,
Satrajit Ghosh
6
10/11/13
Nipype: InvWarp giving me guff
That looks excellent! Thank you, Satra! ~Eric On Wednesday, October 9, 2013 12:15:20 PM UTC-7, satra
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fsl
invwarp
nipype
Nipype: InvWarp giving me guff
That looks excellent! Thank you, Satra! ~Eric On Wednesday, October 9, 2013 12:15:20 PM UTC-7, satra
10/11/13
Dylan Nielson
,
Satrajit Ghosh
2
7/1/13
Problem running dmri fsl dti example
hi dylan, add (assuming that a lexical sort is indeed what you want for your filenames): datasource.
unread,
error
fsl
Problem running dmri fsl dti example
hi dylan, add (assuming that a lexical sort is indeed what you want for your filenames): datasource.
7/1/13
Danilo
6/27/13
Post-doc position available in Jülich/Düsseldorf
FYI: Post-doc position available in Jülich/Düsseldorf Connectivity endophenotypes of brain disease
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fsl
nipype
spm
Post-doc position available in Jülich/Düsseldorf
FYI: Post-doc position available in Jülich/Düsseldorf Connectivity endophenotypes of brain disease
6/27/13
Danilo
6/27/13
Two PhD positions available in Jülich/Düsseldorf
FYI: Two PhD positions available in Jülich/Düsseldorf The lab: The Brain Network Modelling Group is
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fsl
nipype
spm
Two PhD positions available in Jülich/Düsseldorf
FYI: Two PhD positions available in Jülich/Düsseldorf The lab: The Brain Network Modelling Group is
6/27/13
Marcel Falkiewicz
,
Satrajit Ghosh
3
5/24/13
AvScale output
Thank you Satra! This solves the problem :-) 2013/5/23 Satrajit Ghosh <sa...@mit.edu> hi marcel
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fsl
nipype
AvScale output
Thank you Satra! This solves the problem :-) 2013/5/23 Satrajit Ghosh <sa...@mit.edu> hi marcel
5/24/13